PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00000181.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | HRT-like | ||||||||
Protein Properties | Length: 174aa MW: 19526.4 Da PI: 10.2132 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 38 | 2.8e-12 | 60 | 78 | 13 | 31 |
HRT-like 13 krqPvkgRKRCeeHKGmRi 31 ++Pv+gRKRC+eHKGmRi FANhyb_rscf00000181.1.g00001.1 60 ATPPVQGRKRCAEHKGMRI 78 689***************7 PP | |||||||
2 | HRT-like | 52.2 | 1e-16 | 129 | 157 | 3 | 31 |
HRT-like 3 GviledGsvCkrqPvkgRKRCeeHKGmRi 31 G+il dGs C+++P++gRKRC eHKG+Ri FANhyb_rscf00000181.1.g00001.1 129 GFILPDGSRCRTEPIQGRKRCDEHKGRRI 157 99**************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence Send to blast |
MILKAIPNSV VNRQFSKLCS TDTISGHPDD VLQRLKKISS KPARLILSRG FYLSDRSKLA 60 TPPVQGRKRC AEHKGMRIKA SITVRISDNN VDSKCSVLSN KELDSHDASN VKFETVEFHV 120 SESSTLIFGF ILPDGSRCRT EPIQGRKRCD EHKGRRIQKS NSKSVKEEEV EICA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024181854.1 | 6e-57 | protein EFFECTOR OF TRANSCRIPTION 2-like isoform X2 | ||||
TrEMBL | A0A2P6RK91 | 1e-55 | A0A2P6RK91_ROSCH; Putative transcription factor HRT family | ||||
STRING | XP_004288924.1 | 1e-32 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF33979 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26170.1 | 1e-13 |