PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000068.1.g00017.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ARR-B
Protein Properties Length: 730aa    MW: 82162 Da    PI: 4.8521
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000068.1.g00017.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like70.33e-22256308154
                         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                                     k+r++Wtp+LH +F  a++ L G ekA Pk+il++m+vkg+t+ +v+SHLQkY+
  FANhyb_rscf00000068.1.g00017.1 256 KKRIVWTPDLHYKFTAAISAL-GDEKARPKAILNMMGVKGVTMRQVASHLQKYK 308
                                     68*******************.9******************************7 PP
2Response_reg51.94.1e-18201271109
                                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEE CS
                    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivv 77 
                                     +l++d +   ++  +++le+  + +va++++++eal l+ e++  ++l++  i+m+++d + +l ++ e++  +p+i++
  FANhyb_rscf00000068.1.g00017.1  20 ILLIDHDTYSLKYTASVLEQYSF-NVAAVQQASEALSLISEQNhcYELVMANINMSDSDSVPFLHTLLEKD--IPVILM 95 
                                     7999*******************.***************888888**********************9977..****** PP

                                     ESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
                    Response_reg  78 tahgeeedalealkaGakdflsKpfdpeelvk 109
                                     +++ +++++ ++l+ Ga+ fl Kp++ e+l +
  FANhyb_rscf00000068.1.g00017.1  96 SSEMNDDLMRKVLDKGASFFLQKPIPLEDLKN 127
                                     *****************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521728.68E-2016136IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.9E-2117147No hitNo description
SMARTSM004481.2E-818129IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011029.38719133IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.1E-1420127IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.31E-1421132No hitNo description
PROSITE profilePS512949.45253312IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.6E-23254313IPR009057Homeodomain-like
SuperFamilySSF466893.05E-15255313IPR009057Homeodomain-like
TIGRFAMsTIGR015573.5E-19256310IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    Send to blast
MDNMSFTTDL VPEFAHGLKI LLIDHDTYSL KYTASVLEQY SFNVAAVQQA SEALSLISEQ  60
NHCYELVMAN INMSDSDSVP FLHTLLEKDI PVILMSSEMN DDLMRKVLDK GASFFLQKPI  120
PLEDLKNVWQ HVYWKTNPMK DTGKENSEEW MDWLDNGVEM NEDSEEFGHS FGGGFDKRQK  180
PYETDLEDLQ SYSTEDFFPT ESDEQKASGK KHSADNTVEQ GRMKRLKPTV QQTDSNSIAR  240
YQEGIVEKHS NDKTKKKRIV WTPDLHYKFT AAISALGDEK ARPKAILNMM GVKGVTMRQV  300
ASHLQKYKNQ VRRIYQTGIF TGRTSLSNSS SWNKGTSRFG GGGKKPIESA TPSSSTRSSI  360
SAASFNNHDY RMQNRNSSHE GLSRYGNHDT NCPNDSLRTD GWFQHMNQIP ETSTLAYRNE  420
LIEYLKRRQR LGLEESNGKV TENLPSMTYM TSEVDSPNMS TNTFQLPNQP PVVHQEQNCS  480
PALTEPFDSR KQKQVSTEVL EQQNMNLPST NDSTPEAHSP YILANAYQFS NELSAVTQQK  540
KCTPVVSGPI YFEIEDKFSI EDERSELVEL MPMNLPSMNY MTPEDTSVNQ EKYHASANST  600
SSGTHNSFST EVAGTNELLD FLLDSPGKEY MTDGDASTQK SENAVQLPKE PLLREQFCTP  660
GLNGHFGTQY ENKFSERTTE LGFLEKETPS FIANNLGNLP GDFNDGSEKL DSLAGEAPPA  720
ISSNEHQPPV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011464078.10.0PREDICTED: uncharacterized protein LOC105351463
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144041618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.18e-39pseudo-response regulator 6