PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00000068.1.g00004.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

bZIP

Protein Properties

Length: 812aa MW: 86368.2 Da PI: 5.8388

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00000068.1.g00004.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.8	4.9e-13	342	403	2	63
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ kr r+++NRe+A+ sRqRKk ++eeLe+kv ++ + +L ++++ + e a+lk+++ FANhyb_rscf00000068.1.g00004.1 342 EDEKRKARLMRNRESAQLSRQRKKHYVEELEDKVRAMHTTIADLNNKMSYIMAENATLKQQL 403 6789*******************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.6E-16	341	405	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.496	343	406	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.8E-12	344	403	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.4E-17	345	404	No hit	No description
SuperFamily	SSF57959	1.41E-11	345	403	No hit	No description
CDD	cd14704	1.40E-20	346	397	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0042538	Biological Process	hyperosmotic salinity response
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005783	Cellular Component	endoplasmic reticulum
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 812 aa Download sequence Send to blast
MEDSVVAGDP PIPPPDLAPN CSDSGEDFES LPIPPLDPQF FSSDAGMATM AADSFMSDLG 60 FGFGSDDNCD YELTFDDLDN LYLPSEADDF LLPEAQPSAG STVMLKSESP ESGSSGISKG 120 SDGVVSGFLN YPSESGGHDQ EFSENSGGPL SSQGSGIPEA VNSPTHSGNS DRDVSSNVTT 180 ADEKVKIEEE VTRSGFVAKR KKEIGGEEGN MESRSSKFRR SESSGGSGGC LNDDDEKRKA 240 SVILKSESPE SGSSGISKGS DGVVSGFLNY PSSESGGHDQ EFSENSGGPL SSQGSGIPEA 300 ENSPTHSGNS DRDVSSNVTT ADEKVKIEEE SSGGSGGCLN DEDEKRKARL MRNRESAQLS 360 RQRKKHYVEE LEDKVRAMHT TIADLNNKMS YIMAENATLK QQLSSGSGIC PPPPPPGMYP 420 MPPMGYPWMP YSPYVVKPQG SQVPLVPIPR LKPQQPAAAP KPKKKSESKS KTKKVASISF 480 LGLLFFLLLF GGLVPMLNVG FGGSSYVRDR FYDQQRAKVL KVPGHLNGSE GNVPLGVSGG 540 KFDVSNKIHE RAHKQKEQGV PGVGNASEPL VASLYVPRND KLVKIDGNLI IHSVLASEKA 600 KAHKKSREAR VEGAKGFVSA LAIPEAGVNR GRRAPLYRTP AGQRKALTAG SADGKLQQWF 660 REGLAGSLLS SGMCTEVFQF DVSAANSGGI IPASSVANVS EHNSNATRLN RGGNRRILGG 720 RAIPLAGSNH NVTDEERAIR NNQSRNNFQV SNSSVVVSVL VDPREAGDID IDGMIKPKSL 780 SRVFVVLLLD SVKYVTYSCV LPRSAPPHLV TT

Sequence ? help Back to Top

Protein Sequence Length: 812 aa Download sequence Send to blast

MEDSVVAGDP PIPPPDLAPN CSDSGEDFES LPIPPLDPQF FSSDAGMATM AADSFMSDLG  60
FGFGSDDNCD YELTFDDLDN LYLPSEADDF LLPEAQPSAG STVMLKSESP ESGSSGISKG  120
SDGVVSGFLN YPSESGGHDQ EFSENSGGPL SSQGSGIPEA VNSPTHSGNS DRDVSSNVTT  180
ADEKVKIEEE VTRSGFVAKR KKEIGGEEGN MESRSSKFRR SESSGGSGGC LNDDDEKRKA  240
SVILKSESPE SGSSGISKGS DGVVSGFLNY PSSESGGHDQ EFSENSGGPL SSQGSGIPEA  300
ENSPTHSGNS DRDVSSNVTT ADEKVKIEEE SSGGSGGCLN DEDEKRKARL MRNRESAQLS  360
RQRKKHYVEE LEDKVRAMHT TIADLNNKMS YIMAENATLK QQLSSGSGIC PPPPPPGMYP  420
MPPMGYPWMP YSPYVVKPQG SQVPLVPIPR LKPQQPAAAP KPKKKSESKS KTKKVASISF  480
LGLLFFLLLF GGLVPMLNVG FGGSSYVRDR FYDQQRAKVL KVPGHLNGSE GNVPLGVSGG  540
KFDVSNKIHE RAHKQKEQGV PGVGNASEPL VASLYVPRND KLVKIDGNLI IHSVLASEKA  600
KAHKKSREAR VEGAKGFVSA LAIPEAGVNR GRRAPLYRTP AGQRKALTAG SADGKLQQWF  660
REGLAGSLLS SGMCTEVFQF DVSAANSGGI IPASSVANVS EHNSNATRLN RGGNRRILGG  720
RAIPLAGSNH NVTDEERAIR NNQSRNNFQV SNSSVVVSVL VDPREAGDID IDGMIKPKSL  780
SRVFVVLLLD SVKYVTYSCV LPRSAPPHLV TT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269\|PubMed:17662035, ECO:0000269\|PubMed:20876872}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004299018.1	0.0	PREDICTED: uncharacterized protein LOC101299380
Swissprot	O22208	1e-139	BZP17_ARATH; bZIP transcription factor 17
TrEMBL	A0A2P6R1C8	0.0	A0A2P6R1C8_ROSCH; Putative transcription factor bZIP family
STRING	XP_004299018.1	0.0	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7487	34	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-116	bZIP family protein

Publications ? help Back to Top
Zhou SF, et al. Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis. New Phytol., 2015. 208(1): p. 188-97 [PMID:25919792] Sagor GH, et al. The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis. Front Plant Sci, 2015. 6: p. 687 [PMID:26442007] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Kim JS,Yamaguchi-Shinozaki K,Shinozaki K ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation. Plant Physiol., 2018. 176(3): p. 2221-2230 [PMID:29367234] Cifuentes-Esquivel N, et al. bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress. J. Cell. Biochem., 2018. 119(8): p. 6857-6868 [PMID:29693271] Guan P, et al. SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance. Plant Physiol., 2018. 178(3): p. 1390-1405 [PMID:30287478]