PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000057.1.g00017.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family C2H2
Protein Properties Length: 314aa    MW: 35877 Da    PI: 8.1156
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000057.1.g00017.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.7e-05105128123
                                     EEETTTTEEESSHHHHHHHHHH.T CS
                         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                                     ++C++C+ksF+    L +H+ + H
  FANhyb_rscf00000057.1.g00017.1 105 WQCGYCKKSFRAEKFLDQHLDNrH 128
                                     58*****************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.6105128IPR007087Zinc finger, C2H2
PROSITE patternPS000280107128IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MKNTTSLFIS ILFLLLFSSS AQKNQDSEIF AASSWPHYLF SYVRTLLQEE EHAHEVHCSR  60
ERSRAAWKII EENAMRSQPS VAFILIMIYL GIRNEHKIHL DINEWQCGYC KKSFRAEKFL  120
DQHLDNRHYN LLNVSGSKCL ADLCGALHCD TVMNTQSSKK KCNPAATARN HHLCEGLANS  180
CFPSDQGPSA HRLNELFLHQ FCHSHTCSGK QKPFSRGGQV KFWFLDALDL QAILHYETSA  240
CILPGYFHTD SDVASYFLCH SLFTPKRDEK GNPRAQAHTK SWAKKETLIV GYKSGLVEQI  300
KDCVPKLTLE HILF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011464213.11e-113PREDICTED: uncharacterized protein LOC101303998
RefseqXP_011464214.11e-113PREDICTED: uncharacterized protein LOC101303998
TrEMBLA0A2P6P5771e-105A0A2P6P577_ROSCH; Putative transcription factor C2H2 family
STRINGXP_004299191.11e-125(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32161319
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63280.14e-68C2H2-like zinc finger protein