PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000032.1.g00007.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bHLH
Protein Properties Length: 697aa    MW: 77577.9 Da    PI: 6.5973
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000032.1.g00007.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.4e-111769155
                                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                                    ++++h   E +RR+++ + ++ Lr+ lP+ +    ++K s a+   +Av+YIk Lq
  FANhyb_rscf00000032.1.g00007.1 17 KKMMHRDTEGKRRQEMATLYASLRSTLPPqS---MKGKRSLADHMNEAVNYIKLLQ 69
                                    6899*************************55...*******************998 PP
2HLH22.91.6e-07295345355
                                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                      +   +Er+RR+ +  + + Lr+llP  +    ++K s +e   +Av+YIk+L+
  FANhyb_rscf00000032.1.g00007.1 295 IMRRDNERQRRQLMAIRTASLRSLLPLeS---IKGKRSLSEHINEAVNYIKQLK 345
                                     566789*********************66...********************95 PP
3HLH22.91.6e-07518568355
                                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                      +   +Er+RR+ +  + + Lr+llP  +    ++K s +e   +Av+YIk+L+
  FANhyb_rscf00000032.1.g00007.1 518 IMRRDNERQRRQLMAIRTASLRSLLPLeS---IKGKRSLSEHINEAVNYIKQLK 568
                                     566789*********************66...********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-111585IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.7921668IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.35E-61673No hitNo description
PfamPF000102.3E-71769IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-71885IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.592274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.58E-10292366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.665292344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.34E-7292349No hitNo description
PfamPF000101.1E-4297344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-7297364IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.06298350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.665515567IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-10515589IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.73E-7515572No hitNo description
PfamPF000101.1E-4520567IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-6520587IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.059521573IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    Send to blast
MDNDQPCANS IIDNNQKKMM HRDTEGKRRQ EMATLYASLR STLPPQSMKG KRSLADHMNE  60
AVNYIKLLQT RIKELGSRRD DLKIQRSSPD LSSTSALGLD GNLSGSTGSS SSLLAGNFST  120
SRAVVNPCLG GVEIVISCVT GVVLSRLLQI LLEQGLTVTN CATTRVNKRL VYTIQSEVSN  180
PSCIDFPGLE QTLTKAGAQV VGLTYRRLSL LHNFMVISYR LCSMFPFPHD HQSEYLGFEV  240
SSTPQQEDFM QQDLIMMPDS LDVLPSHDLQ GFSLSNINIS EANVNKDTDA HERKIMRRDN  300
ERQRRQLMAI RTASLRSLLP LESIKGKRSL SEHINEAVNY IKQLKEKTQE LNAKREELTR  360
VHQQYYSSSA HDFSPEITGN LGTKSTSNIM VGPTCWGGVE IVVSTSSTNC SELEGFALSG  420
VLKALLAEGL TIVECASTTV NQRLCSMFPF PHDHQSEYLG FEVSSTPQQE DFMQQDLIMM  480
PDSLDVLPSH DLQGFSLSNI NISEANVNKD TDAHERKIMR RDNERQRRQL MAIRTASLRS  540
LLPLESIKGK RSLSEHINEA VNYIKQLKEK IQEQNAKREE LRRVHQQYYS SSAHDFSPEI  600
TGNLGAKSTS NIMVGATCWG GVEIVVSTSS TNCSELEGFA LSGVLKALLA EGLTIVECAS  660
TTVNQRLFHT IQCEVEDLAC QNLPELQLKL NYLCNSG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004308134.11e-178PREDICTED: transcription factor bHLH36-like isoform X2
TrEMBLA0A2P6SMS91e-123A0A2P6SMS9_ROSCH; Putative transcription factor bHLH family
STRINGXP_004308133.11e-160(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.19e-38bHLH family protein