PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00013874_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | NAC | ||||||||
Protein Properties | Length: 131aa MW: 15576.5 Da PI: 7.4369 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 41.6 | 4e-13 | 9 | 122 | 22 | 128 |
NAM 22 kvegkkleleevikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 ++++++l+ ++v+ ++d+y ePw++ +++k+ +k++yfF++++k ++t+k +r++ sg+Wk ++k FANhyb_icon00013874_a.1.g00001.1 9 EIRNNQLPGKQVVFDCDLYGPqEPWEIWEAYKTrrpndlrLNKDLYFFTQHKKMSSTDKCIRRTVGSGTWKGNDSEK 85 56777888888999999997549****743333234333334588******************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +v+s +g+++g k +++ ++++ ++ W++ e+ l FANhyb_icon00013874_a.1.g00001.1 86 PVKSFeTGRVIGSEKKFTYE--NEESDHHGCWILFEFYL 122 **99768899********98..44445699******976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 14.789 | 1 | 131 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.62E-13 | 20 | 125 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-6 | 31 | 121 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MQQASAMEEI RNNQLPGKQV VFDCDLYGPQ EPWEIWEAYK TRRPNDLRLN KDLYFFTQHK 60 KMSSTDKCIR RTVGSGTWKG NDSEKPVKSF ETGRVIGSEK KFTYENEESD HHGCWILFEF 120 YLDRSLRDKK E |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011468607.1 | 4e-81 | PREDICTED: protein ATAF2-like | ||||
TrEMBL | A0A2P6PFM0 | 1e-63 | A0A2P6PFM0_ROSCH; Putative transcription factor NAM family | ||||
STRING | XP_004306296.1 | 2e-63 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 2e-06 | NAC family protein |