PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00011989_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | WRKY | ||||||||
Protein Properties | Length: 184aa MW: 20767.5 Da PI: 10.2476 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 28.9 | 2.4e-09 | 165 | 184 | 2 | 21 |
--SS-EEEEEEE--TT-SS- CS WRKY 2 dDgynWrKYGqKevkgsefp 21 +D ++WrKYGqK++kgs++p FANhyb_icon00011989_a.1.g00001.1 165 SDVWAWRKYGQKPIKGSPYP 184 79****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.3E-7 | 158 | 184 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 13.345 | 159 | 184 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-6 | 162 | 184 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.0E-4 | 166 | 184 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
LLNMEDDWDL TVVVRGCSTA TTTTTKPTTS FILDHHHHHH FHSSPLLSSS FGQQGFVSNN 60 TSQTQTQTQT FSVLPIVPDP IKPTSAIEEL HDLYKPFFPK SHHKIHTPSL LSPPPQITPQ 120 PNFSSHQQLH KHQPKLSATN TTQRSKKRKN LLKKVCQVPA ESLSSDVWAW RKYGQKPIKG 180 SPYP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011470488.1 | 7e-99 | PREDICTED: WRKY transcription factor 22 | ||||
TrEMBL | A0A2P6SHY3 | 4e-79 | A0A2P6SHY3_ROSCH; Putative transcription factor WRKY family | ||||
STRING | XP_004308337.1 | 2e-99 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF25783 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 5e-19 | WRKY family protein |