PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00011775_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | G2-like | ||||||||
Protein Properties | Length: 39aa MW: 4471.16 Da PI: 10.4432 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 28.2 | 4.2e-09 | 22 | 39 | 2 | 19 |
G2-like 2 prlrWtpeLHerFveave 19 prlrWtpeLH++Fv+a+e FANhyb_icon00011775_a.1.g00001.1 22 PRLRWTPELHHCFVQAIE 39 8***************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.1E-8 | 18 | 39 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 39 aa Download sequence Send to blast |
MSTSSSCGRN GAVRPYIRSK VPRLRWTPEL HHCFVQAIE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024195163.1 | 5e-21 | transcription repressor KAN1-like | ||||
TrEMBL | A0A2P6R4F1 | 1e-19 | A0A2P6R4F1_ROSCH; Putative transcription factor MYB-HB-like family | ||||
STRING | XP_004297794.1 | 2e-20 | (Fragaria vesca) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02060.1 | 5e-13 | G2-like family protein |