PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00011738_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | WRKY | ||||||||
Protein Properties | Length: 198aa MW: 21949.1 Da PI: 10.5326 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.7 | 6.5e-10 | 158 | 176 | 3 | 21 |
-SS-EEEEEEE--TT-SS- CS WRKY 3 DgynWrKYGqKevkgsefp 21 D+y+WrKYGqK++kgs++p FANhyb_icon00011738_a.1.g00001.1 158 DEYSWRKYGQKPIKGSPYP 176 9*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 11.026 | 151 | 176 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.5E-8 | 152 | 176 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.62E-7 | 154 | 177 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.7E-4 | 156 | 191 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.3E-6 | 158 | 177 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence Send to blast |
PATFPPNQHT QNQKVILGNP VLDMSVNLSL QNVQPKPFQQ LHRIPVHPQQ FTGINLAFNK 60 PSTTPSSSKA ASFMSCLSMD AGRVANYGSN SFRLISGCMP QPMDQISQLM RGADVQQNSS 120 LQCGSSEKCS TPRKRRLRVR KSFKVPEGGK NVAHIPGDEY SWRKYGQKPI KGSPYPSYMQ 180 SLLYIGKTHN WDTISVAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 134 | 140 | RRLRVRK |
2 | 135 | 144 | RLRVRKSFKV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004302062.1 | 1e-122 | PREDICTED: probable WRKY transcription factor 74 | ||||
TrEMBL | A0A2P6R5V2 | 3e-75 | A0A2P6R5V2_ROSCH; Putative transcription factor WRKY family | ||||
STRING | XP_004302062.1 | 1e-121 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2637 | 34 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28650.1 | 5e-33 | WRKY DNA-binding protein 74 |