PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00004712_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 323aa    MW: 37281.1 Da    PI: 5.1728
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00004712_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.81.4e-2191443127
                               NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikev.diy...kvePwdLp.k...kvkaeekewyfFskrdkkyat 70 
                                       +G+rFhPtd el+ ++L+ k+++++  + +  i+e+ diy    +ePwd+  k   ++ +e + +yf++kr k ++ 
  FANhyb_icon00004712_a.1.g00001.1   9 KGMRFHPTDVELIEYFLHDKADADQAGCYSSfIHECnDIYgekAMEPWDIWdKyggSTCEEGEPLYFYTKRIKLNSD 85 
                                       7**********************9966655459999899844357*****733443222355677************ PP

                               NAM  71 gkrknratksgyWkatgkdkevlsk...kgelvglkktLvfy..kgrapkgektdWvmheyr 127
                                       gkr nr++ sg+W+      +v+++   + + +g+ + + +   +g +  +++  W+mhey+
  FANhyb_icon00004712_a.1.g00001.1  86 GKRFNRKVGSGTWSGE--YSKVVASsqnGISIIGTMRNFRYEiiRGCD-ATQNGAWLMHEYE 144
                                       *************954..445555422333448888888887544433.34789*******7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.3327161IPR003441NAC domain
SuperFamilySSF1019415.1E-229159IPR003441NAC domain
PfamPF023651.7E-159144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MAAPVMQIKG MRFHPTDVEL IEYFLHDKAD ADQAGCYSSF IHECNDIYGE KAMEPWDIWD  60
KYGGSTCEEG EPLYFYTKRI KLNSDGKRFN RKVGSGTWSG EYSKVVASSQ NGISIIGTMR  120
NFRYEIIRGC DATQNGAWLM HEYESAFDIE HDYVICALKR NPRRAQANQE DAEITKKNSV  180
KKRKSASFVD HQSRKRKKKL KEEEISEVID LEPSNMVKEE RKEETAYDDQ GRSSCTQLPE  240
QQPYHHDQDN VTDYFSGRLG NNYDDGICLD DLIGPINSPY YKSFQYENQL YHSHDSKFSF  300
MDYTNGGTSQ LPENQLYHGS DDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181198KRKSASFVDHQSRKRKKK
2193197RKRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004305000.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A2P6R6W71e-124A0A2P6R6W7_ROSCH; Putative transcription factor NAM family
STRINGXP_004305000.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3257222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.18e-15NAC-domain protein 101