PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00003285_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family G2-like
Protein Properties Length: 178aa    MW: 19681.8 Da    PI: 11.218
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00003285_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like43.19.1e-14129177550
                           G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkv...kgLtlehvkSHL 50 
                                        Wt e H+r veav++LGG  kAtP ++l+lm+    +gLt+  ++ HL
  FANhyb_icon00003285_a.1.g00001.1 129 SWTVEHHKRVVEAVTKLGGLSKATPTAVLRLMDEerrQGLTVRILRRHL 177
                                       6*******************************9633369**99999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-10129177IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-7129164IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MMKTHAVKGL TSVREKQSPS LTHGCGWGSS RINGVDAGAP QDICRRGDPL GGFNKVGTPR  60
SVLAEMVNNV KGLSQRTLVH HMVLFQPLNK RTHLSLGRRS QPACSDPYQS LVNDFEGLQV  120
ACPKRLFSSW TVEHHKRVVE AVTKLGGLSK ATPTAVLRLM DEERRQGLTV RILRRHLS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1760367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.19e-09G2-like family protein