PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00002302_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family BES1
Protein Properties Length: 247aa    MW: 26329.2 Da    PI: 7.0083
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00002302_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82241.84.1e-1317972148
                            DUF822  72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvls 144
                                       g+kp+   e+ag+ +++s +ss+q s++ss+++spv+sy+asp+sssfpsp+++d ++++ +    + llp+l++l+
  FANhyb_icon00002302_a.1.g00001.1   1 GCKPP--IEIAGTPTNMSACSSMQPSPQSSSFPSPVPSYHASPSSSSFPSPTRFDGNPSSYHqnpsSYLLPFLHNLA 75 
                                       67887..89**********************************************9998766678888999999988 PP

                            DUF822 145 lvss 148
                                       +++ 
  FANhyb_icon00002302_a.1.g00001.1  76 SIPT 79 
                                       7665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.2E-11174IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009742Biological Processbrassinosteroid mediated signaling pathway
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
GCKPPIEIAG TPTNMSACSS MQPSPQSSSF PSPVPSYHAS PSSSSFPSPT RFDGNPSSYH  60
QNPSSYLLPF LHNLASIPTN LPPLRISNSA PVTPPLSSPT SRGSKRKPDW ESLTNGCINS  120
LRHPLFAASA PSSPTRRHHL APATIPECDE SDASTVDSGR WVSFQTGVPS VAPPSPTFNL  180
MKPVAEQNVL QQTVGHGGIG WGNPGERARG SEFEFESGRL KAWEGERIHE VGVEDLELTL  240
GNGKMHS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00237DAPTransfer from AT1G75080Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004300602.11e-177PREDICTED: BES1/BZR1 homolog protein 2
SwissprotQ94A434e-79BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLM5VR331e-136M5VR33_PRUPE; Uncharacterized protein
STRINGXP_004300602.11e-177(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.34e-59BES1 family protein