PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00000435_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 240aa    MW: 26026.8 Da    PI: 7.1976
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00000435_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_154.72.1e-1773125557
                                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                                       kr rr+ +NRe+ArrsR+RK++ ++eLe kv+ L  eN++L  +l   ++++ 
  FANhyb_icon00000435_a.1.g00001.1  73 KRIRRMVSNRESARRSRRRKQQHLQELEGKVDILRVENSTLYRQLTDASQHYR 125
                                       9****************************************988877777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-1268124No hitNo description
SMARTSM003381.2E-1568133IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.24371122IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.84E-1373123No hitNo description
PfamPF001704.5E-1473123IPR004827Basic-leucine zipper domain
PROSITE patternPS0003607691IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
METLLSPQNL TPKNSSISAT MDCQSSICVG TPTSAANPVG RDNQARGATS GSSGDQSDED  60
DFENSHTDPL DNKRIRRMVS NRESARRSRR RKQQHLQELE GKVDILRVEN STLYRQLTDA  120
SQHYRDADTN NRVLKSDVEA LRAKVKLAED MVARGSLTSS FNQLLQGHLS TPQPLNPHTL  180
RGVAHVSPTI TIHGDDTSYA GIAVSGQNSG MGLGNAAGMT NSNMGTRIMS DAVSCVSDMW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18592RRSRRRKQ
28792SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004291263.11e-154PREDICTED: basic leucine zipper 9
SwissprotQ9FUD32e-67BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A2P6PZU71e-138A0A2P6PZU7_ROSCH; Putative transcription factor bZIP family
STRINGXP_004291263.11e-154(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-54basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]