PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462955976
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 411aa    MW: 45566.1 Da    PI: 4.5776
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462955976genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM522.3e-163014310128
        NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvf 108
                +deelv ++L+++ ++++l+l +v++ vd   ++P+ +  ++  e + w+  ++ d++   g ++    +k+gyWk   +++ + + +++ +g+k ++ f
  462955976  30 SDEELV-RFLAERKAEDPLPL-DVMTGVDCSVLDPRCFTGCT--EATIWHLKVSGDQEIYDGAENGIkNAKNGYWKPLYSSR-IPT-NTAITGVKIVFEF 123
                79****.999999999****9.99**************8554..568999988888877776655544899*****998855.555.6899********* PP

        NAM 109 ykgrapkgektdWvmheyrl 128
                y+g+ap g++t+W+mhey++
  462955976 124 YEGQAPCGKRTEWMMHEYQV 143
                ******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.1E-2221164IPR003441NAC domain
PROSITE profilePS5100524.13421164IPR003441NAC domain
PfamPF023651.9E-830143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MLRRVMMLPP IHGPCEKLAA LDICIRDSWS DEELVRFLAE RKAEDPLPLD VMTGVDCSVL  60
DPRCFTGCTE ATIWHLKVSG DQEIYDGAEN GIKNAKNGYW KPLYSSRIPT NTAITGVKIV  120
FEFYEGQAPC GKRTEWMMHE YQVEQNDEAN LPQDYKSLCK VFPQSDKNTE SGQNSLNANA  180
PNDTLESYLQ YLARIEEPKD TVSANEDDTS SSTGQHEQKT ESAADDVIAT GDYIELNDLI  240
GPCIEQHQQN TENAELNDLL NSEASSSTSE STSKRSMISE EYFDSDAFLR EILEDSNIPD  300
GQHKDHKFSI AAPTKSANVV VGPTEQGLVH IHGDNATVAG TSQQKQVPGG DGDQHSSKEC  360
QQQSSSIASC FPTRHVKRSH SNSSDSPQNS EKSQKMRPNR STTLGRDPRK D
Cis-element ? help Back to Top
SourceLink
PlantRegMap462955976
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025797455.11e-154NAC domain-containing protein 76-like isoform X3
TrEMBLA0A2S3IMV31e-153A0A2S3IMV3_9POAL; Uncharacterized protein
STRINGPavir.Ia02619.1.p1e-153(Panicum virgatum)
STRINGPavir.Ib03017.1.p1e-153(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109162632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.12e-16vascular related NAC-domain protein 1