PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462930218
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family CPP
Protein Properties Length: 285aa    MW: 32342.5 Da    PI: 8.2711
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462930218genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR39.98.7e-13132940
        TCR  9 kkskClkkYCeCfaagkkCseeCkCedCkNke 40
               kkskClk+YC Cfa g +Cse+C C+ C+Nke
  462930218  1 KKSKCLKLYCPCFAGGGYCSEKCGCQPCFNKE 32
               8*****************************98 PP
2TCR50.44.4e-1680116339
        TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                ++gCnCkks+ClkkYC+C+++g+ Cs  C+CedC+N 
  462930218  80 RRGCNCKKSSCLKKYCDCYQEGTGCSLFCRCEDCQNP 116
                589*********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5163428.5621118IPR005172CRC domain
PfamPF036382.9E-9132IPR005172CRC domain
SMARTSM011145.2E-7134IPR033467Tesmin/TSO1-like CXC domain
SMARTSM011144.2E-1578119IPR033467Tesmin/TSO1-like CXC domain
PfamPF036382.4E-1181115IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
KKSKCLKLYC PCFAGGGYCS EKCGCQPCFN KEAFAETVQN THKVLLSRQK RMSLKINRRS  60
EANAEAMEDA HHSSSSTPPR RGCNCKKSSC LKKYCDCYQE GTGCSLFCRC EDCQNPFGKN  120
EGIMAEDSKR YLYTGADLDH SEGEHEFVVE RSPRLQSPIS KESSFQTPPH LRASSRDTHV  180
FPQALSQWQA LPRSWHCSKR NNNDRVIDDS GNYKNSSHDW VLSKHEDSYS ISKCIQILNS  240
MVELSLVEKS VAPDVFLQQG NREIFISLGG EVRALWLKRQ IQHLT
Cis-element ? help Back to Top
SourceLink
PlantRegMap462930218
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025810095.10.0protein tesmin/TSO1-like CXC 3
TrEMBLA0A0A8ZWM00.0A0A0A8ZWM0_ARUDO; Uncharacterized protein
STRINGPavir.Ca01393.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101592937
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.12e-37Tesmin/TSO1-like CXC domain-containing protein