PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462930063
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 431aa    MW: 46710.6 Da    PI: 5.5414
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462930063genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-1966115255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+G+r+++ +g+W+AeIrdps+     r++lg++ taeeAa+a++a ++k++g
  462930063  66 RYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYNTAEEAARAYDAEARKIRG 115
                7********.**********965...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.9E-3266124IPR001471AP2/ERF domain
PfamPF008476.4E-1266115IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-2266125IPR016177DNA-binding domain
CDDcd000181.25E-3366124No hitNo description
PROSITE profilePS5103224.09266123IPR001471AP2/ERF domain
SMARTSM003804.5E-3866129IPR001471AP2/ERF domain
PRINTSPR003673.0E-116778IPR001471AP2/ERF domain
PRINTSPR003673.0E-1189105IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0034059Biological Processresponse to anoxia
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MSLWACLFNP LKVLRSGFWF VELQPNEAAD SRAKKTDLDA DDELTPKPAQ NDGPVATSAK  60
RSRKNRYRGI RQRPWGKWAA EIRDPSKGVR VWLGTYNTAE EAARAYDAEA RKIRGKKAKV  120
NFPDEVSNDQ KSILKPSAAD PTKLTQPLKN CANEAFGHPN NGDNDLFAMF AFSDNKVPLK  180
PAETAVSNGQ KSILKPSAAD PTKLTQPLKN CADEAFGHPT NGDNDLFAMF AFSDNKVPLK  240
PAETAGFLPP VKPLVPTEGF GTNMLSDQSS NSYGSSDFGW DDETMTSDYT SVFAPNNAVP  300
AYVEPACLQG GPSKRLRNNY GVAVPQGNGA PNLTQDMSGF VPEMKYLPLP YVESSSEVSM  360
DSLLQNDVTQ DGASNGDLWG LDELLLAADV NGVSHVHMIF MAGPLAVVKI KSQILVRVQG  420
ESASSPIIAK I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A9e-2167126363ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A1e-20661251474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462930063
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015611873.11e-127ethylene-responsive transcription factor 1-like
TrEMBLA0A0A9P8101e-153A0A0A9P810_ARUDO; Uncharacterized protein
STRINGOGLUM09G11780.11e-129(Oryza glumipatula)
STRINGOMERI09G08700.11e-129(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP112003142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.16e-26ERF family protein