PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462919689 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | NAC | ||||||||
Protein Properties | Length: 214aa MW: 23925.7 Da PI: 6.9086 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 24.9 | 5.8e-08 | 1 | 27 | 102 | 128 |
NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 ++ Lvfy+gr p+ +ktdW++heyrl 462919689 1 MRCPLVFYRGRPPTRTKTDWMIHEYRL 27 5778*********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.814 | 1 | 51 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.02E-11 | 1 | 51 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MRCPLVFYRG RPPTRTKTDW MIHEYRLAGA RLVPGRRAEA EGWLLCRVFL KPGSTISEEE 60 QEAVQDEEEE EAVAKDSERR TLFRHPPAAT GAGAKYRLSG ARLVPGRRAE AEGWLLCRVF 120 LKPGSTISEE EQEAVQDEEE EEAVAKDSER RTLFRHPRTS TSSRSRMRRS SSNGSRSATP 180 EEADQGGHGQ GVISFAGIIC SAIESVCSCN LQFR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462919689 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 6e-13 | vascular related NAC-domain protein 7 |