PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462915071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 220aa MW: 23974.2 Da PI: 10.7275 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.1 | 3.4e-12 | 131 | 170 | 5 | 41 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k rr+++NReAAr+sR+RKka+i++Le+ + ++Le+e 462915071 131 KTLRRLAQNREAARKSRLRKKAYIQQLETgriRLAQLEQE 170 7789***********************9644467777766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.2E-4 | 127 | 180 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.9E-9 | 127 | 175 | No hit | No description |
PROSITE profile | PS50217 | 8.565 | 129 | 158 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.0E-7 | 131 | 163 | No hit | No description |
Pfam | PF00170 | 1.2E-9 | 131 | 172 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 134 | 149 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MAYPSTSGMI QASSSHHGGT MRRDPEGYDM PSDLDQAVLL YFDGHQAKPS IQEQPQTLNI 60 FPSQPMHVEP SPKGSMTSAA VAQVAGSSKP VKAAGGQFSA GKSSKPALKR EGGGAAASSS 120 DQEGPRRPDP KTLRRLAQNR EAARKSRLRK KAYIQQLETG RIRLAQLEQE VQMARTQGAL 180 WGTGALSPGI TCHIKFISFF ITWLAVHRRD HQLTMCTHVR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462915071 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT055042 | 9e-58 | BT055042.1 Zea mays full-length cDNA clone ZM_BFc0123E11 mRNA, complete cds. | |||
GenBank | KJ727604 | 9e-58 | KJ727604.1 Zea mays clone pUT5464 bZIP transcription factor (bZIP70) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004965885.1 | 5e-90 | transcription factor TGAL8 isoform X1 | ||||
Swissprot | Q69T21 | 6e-71 | TGAL8_ORYSJ; Transcription factor TGAL8 | ||||
TrEMBL | A0A2S3HHY1 | 4e-89 | A0A2S3HHY1_9POAL; Uncharacterized protein | ||||
TrEMBL | K3XWV9 | 1e-88 | K3XWV9_SETIT; Uncharacterized protein | ||||
STRING | Si006417m | 2e-89 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12972 | 21 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 3e-43 | bZIP family protein |
Publications ? help Back to Top | |||
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