PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462893817
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 988aa    MW: 109125 Da    PI: 6.1751
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462893817genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.31.4e-11121170154
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                ++y GV  ++ +g + AeIr p +   +   +lg+f+tae A +a+++a+++  
  462893817 121 PHYIGVKKRP-WGGYTAEIRSPDK---TSWAWLGTFDTAEAAVRAYDEAAREHG 170
                689*******.**********843...6**********************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.58E-19121179No hitNo description
PfamPF008471.0E-6121168IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-14122179IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.3E-22122179IPR001471AP2/ERF domain
PROSITE profilePS5103218.11122179IPR001471AP2/ERF domain
SMARTSM003802.6E-15122185IPR001471AP2/ERF domain
PRINTSPR003673.6E-5123134IPR001471AP2/ERF domain
PRINTSPR003673.6E-5145161IPR001471AP2/ERF domain
SuperFamilySSF520582.69E-29403574IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.101.9E-28403575IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF525405.2E-14586763IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009312.4E-8627756IPR002182NB-ARC
Gene3DG3DSA:3.80.10.102.6E-4755807IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520587.31E-11756809IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.102.6E-4840930IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520587.31E-11855958IPR032675Leucine-rich repeat domain, L domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
Sequence ? help Back to Top
Protein Sequence    Length: 988 aa     Download sequence    Send to blast
MASANRVQAA EAESASSGSC MEGEEEEESA VTQQGFSSGF FLNVRQVAIP RSESTQFIPI  60
RSFRGEQISD SPPVRLSRAN LASGRNEPPS SPPPPVRSDG ARASGVAEAE GEGQLDDAEI  120
PHYIGVKKRP WGGYTAEIRS PDKTSWAWLG TFDTAEAAVR AYDEAAREHG GPKAKTTFPS  180
PIAWRAPTAP FPSPNPPTGG ATSSSRRSTV ESSGADIEAK TMRLPFKPPT AAATRSSIGS  240
TVDLLGSYIM ASEPTPTLTP TKAEAIRRLL QQLAHVRTTI SSPGSELLSD AWLSTVEHVM  300
ADAEDCLHFL HYKMILVQLG ITREQQTARS SSSSETSLRI PCVIHCIRIC LGILTTLSII  360
GIDHKKEAQE HPVFAFDDLT TAGQYRAWSI PPQVSNPIYL FCSAIRDLLY LDLSGCSSLA  420
KLPTSIGTLD NLNALNLSSC YSLHALPVSL GSLKKLHILV LSFCRKLRSL PLSLCELSKL  480
RLLDLSRCSG LEILPNAVVN LGHLENLNLS DCKRLKELPQ PFGSLQGLKY LNLSGCHGMD  540
LDVKYLYNLA NLECLNLSPH THIKGFPDSF QDLANRLEMM RWWKKNWVHP RCNPNVASLQ  600
SYRCHEQRII DKLLYCAFNE GDATSDQGVT SICIVGESGM GKTEMLHRIY NDPMILDTFN  660
LRIWIPEFTV CDKKSLLIKI MEFTTCTCFS DASMSVLEDI VIEELTGKRL LLALEDSDIE  720
NKNFWGDVRR LLNVSAKGSG LVITTKNMEV PNLVGTMQTL ELKNCCHLTE LPRSTNNLSK  780
LRHLDVRKKH GDTKVGMPHV SELANLTGLR GHVHITGLEN IKTADDTREA NMMDKLFIES  840
LTLEWCYDDE SIDDDLGKEV SNDILQNLQP NSNLGELVIR NYAGSLFPVW IQNSYLDKLV  900
SITFDNCQEC SELPHLGDLP SLKYLFIQRM NSVERLGLDS SSSATESKHS PRFPSLEEVC  960
WRTISGIIQL VQGCVTVAIT ETQQDAKH
Cis-element ? help Back to Top
SourceLink
PlantRegMap462893817
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002459691.21e-162uncharacterized protein LOC8057272
RefseqXP_008652236.21e-165uncharacterized protein LOC103632191
RefseqXP_020396819.11e-165uncharacterized protein LOC103632191
RefseqXP_020396820.11e-165uncharacterized protein LOC103632191
TrEMBLA0A0A9BT190.0A0A0A9BT19_ARUDO; Uncharacterized protein
STRINGPavir.Ba02315.1.p1e-173(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125771216
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-13erf domain protein 9