PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462886415
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 227aa    MW: 23490.9 Da    PI: 5.7247
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462886415genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-183180255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  462886415 31 QYKGVRMRS-WGSWVSEIRAP---NQKRRIWLGSYATAEAAARAYDAALLCLKG 80
               6*****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.0E-303090IPR001471AP2/ERF domain
PROSITE profilePS5103222.3263188IPR001471AP2/ERF domain
CDDcd000181.10E-143187No hitNo description
SuperFamilySSF541717.85E-203189IPR016177DNA-binding domain
PfamPF008471.7E-113180IPR001471AP2/ERF domain
SMARTSM003802.5E-363194IPR001471AP2/ERF domain
PRINTSPR003671.7E-83243IPR001471AP2/ERF domain
PRINTSPR003671.7E-85470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MVKNPSNGVA AFVDAQARPE SVGGGKAATR QYKGVRMRSW GSWVSEIRAP NQKRRIWLGS  60
YATAEAAARA YDAALLCLKG SDAVLNFPSS SPSSSSSTTS WRHVTERAAA AAAAAFDAGV  120
AIAGSMDDRC SSSAGATTPT STASLSTPIS RADRGGHQEH ATPSSSSAAA TSTGSSAAQG  180
EELWADLLDA FASPKCMDLM AAGASPFAST WEEPEDDGEL MRLWSFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-132788163ATERF1
3gcc_A1e-132788163ATERF1
5wx9_A2e-1331901474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462886415
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0689341e-78AK068934.1 Oryza sativa Japonica Group cDNA clone:J023003E11, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025795709.11e-75ethylene-responsive transcription factor ERF014-like
TrEMBLA0A3L6TSU03e-77A0A3L6TSU0_PANMI; Uncharacterized protein
STRINGPavir.Ia03856.1.p8e-76(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108303040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77640.11e-20ERF family protein