PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462868452 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 83aa MW: 9925.45 Da PI: 10.895 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.8 | 1.5e-15 | 17 | 67 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++Nk+L + eelk+ 462868452 17 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNKELERKQEELKES 67 79**********************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.0E-16 | 12 | 67 | No hit | No description |
PRINTS | PR00041 | 1.8E-5 | 12 | 28 | IPR001630 | cAMP response element binding (CREB) protein |
SMART | SM00338 | 3.4E-11 | 13 | 74 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.806 | 15 | 67 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-13 | 17 | 68 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.30E-17 | 17 | 69 | No hit | No description |
SuperFamily | SSF57959 | 4.0E-12 | 17 | 67 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 20 | 35 | IPR004827 | Basic-leucine zipper domain |
PRINTS | PR00041 | 1.8E-5 | 30 | 50 | IPR001630 | cAMP response element binding (CREB) protein |
PRINTS | PR00041 | 1.8E-5 | 50 | 67 | IPR001630 | cAMP response element binding (CREB) protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence Send to blast |
MIRGRRNGAG VEKVVERRQR RMIKNRESAA RSRARKQAYT MELEAEVQKL KEQNKELERK 60 QEELKESQKN EVIAFIFLTY MPS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462868452 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK065873 | 9e-59 | AK065873.1 Oryza sativa Japonica Group cDNA clone:J013049N23, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021320780.1 | 5e-35 | bZIP transcription factor TRAB1-like isoform X2 | ||||
Swissprot | Q6ZDF3 | 2e-31 | TRAB1_ORYSJ; bZIP transcription factor TRAB1 | ||||
TrEMBL | K3ZU33 | 3e-35 | K3ZU33_SETIT; Uncharacterized protein | ||||
STRING | Si030114m | 6e-36 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.1 | 2e-20 | ABRE binding factor 4 |
Publications ? help Back to Top | |||
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