PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462867242
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 380aa    MW: 41704.2 Da    PI: 5.1411
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462867242genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-17173223155
        AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                s+++GVr+++ +g+W+AeIrd +     r kr ++g+++t+eeAa+a++a +++++ 
  462867242 173 SRFRGVRRRP-WGKWAAEIRDpV-----RkKRKWIGSYDTEEEAAAAYEAQAREFRA 223
                789*******.**********44.....55********************9999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.3E-10173223IPR001471AP2/ERF domain
CDDcd000181.04E-14173206No hitNo description
SuperFamilySSF541714.38E-17173224IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-20174223IPR001471AP2/ERF domain
PROSITE profilePS5103220.534174233IPR001471AP2/ERF domain
SMARTSM003801.4E-18174235IPR001471AP2/ERF domain
PRINTSPR003671.9E-8175186IPR001471AP2/ERF domain
PRINTSPR003671.9E-8197213IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MVLSSRRHQP PSLAPFSSSF GRGAPGLAGS ASGSHDSVLQ LLPDQESVSR LIKAKGNNPI  60
VNQFGIWKLR AKMMPSLRKV RIFCSDPDAT DSSDDEDNQN TKEKKMIREV LIPLNPKAML  120
VLAKKSKAVP VPAKNSKAAL VPEKKSEAST AVKTLAPCET EDLKGPDKKE ASSRFRGVRR  180
RPWGKWAAEI RDPVRKKRKW IGSYDTEEEA AAAYEAQARE FRAEVLAMKA QLPVSQPAAL  240
SSSSSVSCVS SSVSCEQITQ PAENRAFTEI KSEEAVDEIL PDFSETPKAK EISMDVLLGR  300
MDVLLVGDSV RRADELRHDD LTSPEDGFPI SDFVGDDDYI GLADISHLPL PIKDPEFDLD  360
AELDWSGFDF ASMEHELGVL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-111732251366Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178198RRRPWGKWAAEIRDPVRKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMap462867242
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956545.11e-104ethylene-responsive transcription factor ERF021
RefseqXP_004956547.11e-104ethylene-responsive transcription factor ERF021
RefseqXP_022679717.11e-104ethylene-responsive transcription factor ERF021
TrEMBLA0A0A9D6261e-104A0A0A9D626_ARUDO; Uncharacterized protein
STRINGSi030741m1e-104(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.11e-13ERF domain protein 10