PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462862940
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 410aa    MW: 45488.7 Da    PI: 4.7274
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462862940genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.6e-17197247155
        AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                s+++GVr+++ +g+W+AeIrd +     r kr ++g+++t+eeAa+a++a +++++ 
  462862940 197 SRFRGVRRRP-WGKWAAEIRDpV-----RkKRKWIGSYDTEEEAAAAYEAQAREFRA 247
                789*******.**********44.....55********************9999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.4E-10197247IPR001471AP2/ERF domain
CDDcd000181.12E-14197230No hitNo description
SuperFamilySSF541714.9E-17197248IPR016177DNA-binding domain
PROSITE profilePS5103220.534198257IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-20198247IPR001471AP2/ERF domain
SMARTSM003801.4E-18198259IPR001471AP2/ERF domain
PRINTSPR003672.1E-8199210IPR001471AP2/ERF domain
PRINTSPR003672.1E-8221237IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MSPALLPIHG SELPSPPASV TCSLLLQLRQ RGARACGFSF RISRFDLKLR ENLVSDLQDS  60
VLQLLPDQES VSRLIEVEGN NPIVDQFGIW KLRAKMMPSL QKVRIFCCDP DATDSSDDED  120
NQNTKEKKMI REVLIPLKNP KAMLVPAKNS KAVPVRAKNS KAALVPVKKS EALTSVKTLA  180
PCETEDLKGP EKKEASSRFR GVRRRPWGKW AAEIRDPVRK KRKWIGSYDT EEEAAAAYEA  240
QAREFRAEVL AMKAQLPVSQ PAALSSSSSV SCVSSSVSCE QITQPAENRA FTEIESEEAL  300
DEILPDFSET PKAKEISMDV LLGRMDVLLV GDSVRRADEL QHDDFTSPED GFPVSDFVGV  360
THEPLDDDYI GLADISHLPL PIKDPEFNLD AELDWSGFDF ASMEHELGVL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-131982481465Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202222RRRPWGKWAAEIRDPVRKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMap462862940
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956545.11e-111ethylene-responsive transcription factor ERF021
RefseqXP_004956547.11e-111ethylene-responsive transcription factor ERF021
RefseqXP_022679717.11e-111ethylene-responsive transcription factor ERF021
TrEMBLA0A0A9D6261e-113A0A0A9D626_ARUDO; Uncharacterized protein
STRINGSi030741m1e-110(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.11e-13ERF domain protein 10