PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462849304
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 250aa    MW: 28153.1 Da    PI: 8.6305
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462849304genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.98.6e-192078150
        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........k 50
               lppGfrFhPtdeel+++yL++k+++ ++++ ++i+evd++k+ePwdLp+          +
  462849304 20 LPPGFRFHPTDEELITYYLRQKLADGSFTA-RAIAEVDLNKCEPWDLPEvlsvvinsiiA 78
               79*************************999.89**************9545555555540 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-191769IPR003441NAC domain
PROSITE profilePS5100512.7912067IPR003441NAC domain
PfamPF023651.7E-921102IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MSMEGSGGGG GGSTKKEESL PPGFRFHPTD EELITYYLRQ KLADGSFTAR AIAEVDLNKC  60
EPWDLPEVLS VVINSIIAVK LSLSLSLSLS CFGNAYMFFF CFFTATRSVK TFLLLLLLLL  120
LLLLLLLLLL LLLLLLLLLL LLLLLLLLLL LLLLLLLLLL LLLLLLLLLL LLLLLLLLLL  180
LLLLLLLLLL LLLLLLLLLL LLLLLLLLLL LLLLLLLLLL LLLLLLLLLL LLLKKRLYMK  240
KFFSLTWSCH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-1119671462Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMap462849304
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1025113e-70AK102511.1 Oryza sativa Japonica Group cDNA clone:J033095I08, full insert sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2554155
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.24e-24NAC domain containing protein 38