PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thhalv10014931m | ||||||||
Common Name | EUTSA_v10014931mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family | bZIP | ||||||||
Protein Properties | Length: 150aa MW: 17535.2 Da PI: 9.6978 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.9 | 1.4e-10 | 52 | 102 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 kr +r +NR+AA++sR +K++++e L +k+keL + + L+ ++ + +++ Thhalv10014931m 52 KRLKRILSNRVAAQKSRWKKLQYVEDLVKKSKELHRQVSVLRCQVGMASEQ 102 99*********************************9999998777666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.9E-11 | 45 | 108 | No hit | No description |
SMART | SM00338 | 2.0E-10 | 48 | 112 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.048 | 50 | 113 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 5.9E-10 | 50 | 98 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.48E-10 | 52 | 107 | No hit | No description |
CDD | cd14703 | 2.16E-11 | 53 | 104 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 55 | 70 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
MSEPRFPVPR SFQVSNSGSQ EEEKKAGYVN YEVEPGFTIR LRQNIDPAMD PKRLKRILSN 60 RVAAQKSRWK KLQYVEDLVK KSKELHRQVS VLRCQVGMAS EQKRCLEDEQ MELKECISAW 120 FQHFISNEGE IEAYRAEIER LKKKMANMI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Thhalv10014931m |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006399196.1 | 1e-107 | basic leucine zipper 6 | ||||
TrEMBL | V4LAH9 | 1e-106 | V4LAH9_EUTSA; Uncharacterized protein | ||||
STRING | XP_006399196.1 | 1e-106 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14418 | 18 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07160.1 | 7e-66 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Thhalv10014931m |
Entrez Gene | 18017518 |