PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT5G07160.1 | ||||||||
Common Name | ASML3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 150aa MW: 17147.7 Da PI: 10.1495 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.9 | 2.8e-10 | 51 | 106 | 6 | 61 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +r ++NR+AA++sR +K ++++ L +++ eL+ e ++L+++l +++ +l++ AT5G07160.1 51 ILKRIISNRVAAQKSRWKKVQYLDALVKRSMELQREVSELRSQLAITSEQKRYLEN 106 56999************************************999877777666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.8E-12 | 42 | 107 | No hit | No description |
SMART | SM00338 | 2.0E-12 | 46 | 110 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.266 | 48 | 111 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-7 | 50 | 107 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.7E-10 | 50 | 105 | No hit | No description |
CDD | cd14703 | 1.02E-11 | 52 | 102 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 53 | 68 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
MSFPVVATSF GVSQSGSQAG KKKGGYVNYE VEPGFTIRMR QNIDPTTDPK ILKRIISNRV 60 AAQKSRWKKV QYLDALVKRS MELQREVSEL RSQLAITSEQ KRYLENEQRQ LKECISARVQ 120 HCINSDGVIE EYKTEIERLK TNLAPLSNLT |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 145357733 | 0.0 | ||||
Genevisible | 250641_at | 1e-137 | ||||
Expression Atlas | AT5G07160 | - | ||||
AtGenExpress | AT5G07160 | - | ||||
ATTED-II | AT5G07160 | - |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT5G07160.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT5G07160 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY960974 | 0.0 | AY960974.1 Arabidopsis thaliana activator of spomin LUC3 (ASML3) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_196333.2 | 1e-108 | Basic-leucine zipper (bZIP) transcription factor family protein | ||||
TrEMBL | Q56FQ1 | 1e-107 | Q56FQ1_ARATH; Activator of spomin LUC3 | ||||
STRING | AT5G07160.1 | 1e-107 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14418 | 18 | 21 | Representative plant | OGRP126 | 17 | 181 |
Link Out ? help Back to Top | |
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Phytozome | AT5G07160.1 |
Entrez Gene | 830607 |
iHOP | AT5G07160 |
wikigenes | AT5G07160 |
Publications ? help Back to Top | |||
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