PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10011493m
Common NameEUTSA_v10011493mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 437aa    MW: 47745.3 Da    PI: 9.195
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10011493mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.25.6e-16349392548
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      +r+rr++kNRe+A rsR+RK+a++ eLe ++++L++eN++L+ +
  Thhalv10011493m 349 RRQRRMIKNRESAARSRARKQAYTVELEAEIAKLKEENDELQRK 392
                      79*************************************99854 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.8E-16342392No hitNo description
SMARTSM003381.5E-15345409IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978347392IPR004827Basic-leucine zipper domain
CDDcd147076.63E-26349394No hitNo description
SuperFamilySSF579593.19E-12349403No hitNo description
PfamPF001703.1E-13349392IPR004827Basic-leucine zipper domain
PROSITE patternPS000360352367IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MVRRQRDTWL RRQKNELETF LGNGLSQKTK ILQNIIFKNN SMGNEPPGDG GGGGALTRPA  60
LTRQGSIYSL TFDEFQSSLG KDFGSMNMDE LLKNIWSAEE TQAMAMAAST SSMIPVPGGQ  120
EGLQLQRQGS LTLPRTLSTK TVDQVWKDLS KDWNSVGGTS LSQSQSQNQS QSQSQSQSQR  180
QQTLGEVTLE EFLVRAGVVR EEAQVAAKDK DGYFGNDANA GFSVQASPRV VPGLMENLGV  240
ETANHLQVQG SSLPLNVNGA RSTYQQQPIL PKQPGFGYGT QIAQLNSPVV RGGLMGLGDQ  300
PLTNNMGFVQ DGIGKNNGDS SSLSPSPYMF NGGVRGRKSG GTVEKVVERR QRRMIKNRES  360
AARSRARKQA YTVELEAEIA KLKEENDELQ RKQVIANHIC SYLTFISFSF SPYSLCFFTG  420
KDYRNAKESG DGDEES*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10011493m
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ9719720.0JQ971972.1 Eutrema salsugineum abscisic acid responsive elements-binding factor 2 (ABF2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024006260.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1
SwissprotQ9M7Q41e-168AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLV4KLX30.0V4KLX3_EUTSA; Uncharacterized protein
STRINGXP_006393641.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM73427129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.11e-137abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]