PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010941869.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | Dof | ||||||||
Protein Properties | Length: 231aa MW: 24188.2 Da PI: 7.7537 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 113.5 | 9e-36 | 26 | 80 | 5 | 59 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 +cprCds++tkfCyynny++sqPr+fC++CrryWt GG+lrnvP+Gg++rk+ XP_010941869.1 26 RERCPRCDSRDTKFCYYNNYNTSQPRHFCRSCRRYWTLGGSLRNVPIGGSSRKRL 80 568*************************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50884 | 27.894 | 27 | 81 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 6.9E-31 | 27 | 79 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 29 | 65 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 1.0E-18 | 34 | 74 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MPSEMGDGRR RQAERPAEEA AAERGRERCP RCDSRDTKFC YYNNYNTSQP RHFCRSCRRY 60 WTLGGSLRNV PIGGSSRKRL RPSPAATSAA ARPLRPIPTL APPTPSLDLP ASTSPPSAFG 120 SLLSSPVSAG FLALGEPFFE VRTGFELGLG LGLGSGPAAS PSIEELGFGL GTTLLWPTAL 180 LDEEGVVGAG DTWRLGSAGM DCFAAPAPAA VWPDLAIAPA EGSGGAGGEL R |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010941869.1 | 1e-162 | dof zinc finger protein DOF1.7 | ||||
TrEMBL | A0A3Q0I6M5 | 1e-107 | A0A3Q0I6M5_PHODC; dof zinc finger protein MNB1A-like | ||||
STRING | XP_008813223.1 | 4e-99 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP140 | 37 | 367 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21270.1 | 2e-23 | DOF zinc finger protein 2 |