PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010941471.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 420aa    MW: 46784.7 Da    PI: 4.4575
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010941471.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like52.97.9e-173384255
         G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    +r++W + L ++F  a e L G + A+P++i+++m+++g+t+ +v+SHLQkYRl
  XP_010941471.1 33 KRRVWDEYLEQKFRVANETL-GRD-AVPSKIMKHMNIEGITRRQVASHLQKYRL 84
                    799*****************.666.****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-162987IPR009057Homeodomain-like
PROSITE profilePS512949.2182987IPR017930Myb domain
SuperFamilySSF466897.53E-123188IPR009057Homeodomain-like
TIGRFAMsTIGR015576.4E-173385IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MEMEISKSSE AKKGKGGEQI TSKDDENSRK ARKRRVWDEY LEQKFRVANE TLGRDAVPSK  60
IMKHMNIEGI TRRQVASHLQ KYRLKEKNMP FSPSIPDMFG PGTEMAQFKQ VSNQYGLFTT  120
QGCLNCVTLK PSVPVTQMLS FGLQLPLSFN SYPNLTCMQS CNDNSGLHQP KNESQNQLAS  180
HFGMTAEIPS LQSTSTFATN VNNVMGLGGV IPCSFEAAIQ TQQLNTDVQF SSSFRAITQM  240
QQFDCGTRVS ESFREIHQPQ LLNDMDEISD SSCNLVSEYT DAGLVGNNSN DIDATQCKAN  300
EQHTHLVSEN IMTNDACVDG AATNANQFSI TDSEQQHNVS EENTLLVSEY TRNDLTTNGA  360
VINANQSSVN NFEQQYAGSH VVENSKVVEE EDLNHSTEDF ACGDDSWLLM LEDSFEFDFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029116195.10.0LOW QUALITY PROTEIN: two-component response regulator ARR1
TrEMBLA0A2H3YXE90.0A0A2H3YXE9_PHODC; two-component response regulator ORR24-like
STRINGXP_008805335.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.13e-13response regulator 18