PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010941058.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 303aa    MW: 35535.7 Da    PI: 7.5642
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010941058.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.93.6e-2554135186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++e+++Li +r ++e++l  ++ +k+lWe+v+++mre+g++r++ qCk+kw+nl +ryk +++ + ++     ++cp+f++l+
  XP_010941058.1  54 QWSESETRELIGIRGDLERDLTVARWNKTLWEAVAARMREKGYRRTSDQCKCKWKNLVNRYKDTETADPEN----GRQCPFFEELH 135
                     7***************************************************************9999974....678******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500908.23547111IPR017877Myb-like domain
PfamPF138378.2E-2353136No hitNo description
CDDcd122034.70E-2054118No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MMLGGRGGGG GGDGDALSGR IAMIAGLPPQ PNRSWQQQQQ QMRMGKEEKV AQAQWSESET  60
RELIGIRGDL ERDLTVARWN KTLWEAVAAR MREKGYRRTS DQCKCKWKNL VNRYKDTETA  120
DPENGRQCPF FEELHAVFTE RARNMQRLLL ESESSASHSK KKLKRLGVDR SSGEFSEDDD  180
EDDEDSDDEH LSKGRKKKAD KGAHQQQRTK ASGGIHELLQ EFLQQQQRVE VQWRELMERR  240
ALERRAFEQE WRQSMEKLER ERVMLEQAWR EREEQRRMRE ESRADKRDAL LTTLLNKLIQ  300
DDF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1311GGRGGGGGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010941058.10.0trihelix transcription factor GT-3b isoform X2
TrEMBLA0A2H3YU931e-140A0A2H3YU93_PHODC; trihelix transcription factor GT-3b-like
STRINGXP_008803970.11e-141(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.14e-26Trihelix family protein