PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010940608.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 124aa    MW: 13929.5 Da    PI: 8.4512
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010940608.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.3e-201566155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr+++ +g+++AeIrd       + +r++lg+f taeeAa+a+++a+ +++g
  XP_010940608.1 15 TKYRGVRRRP-WGKYAAEIRD----SarQGARIWLGTFNTAEEAARAYDRAAYAMRG 66
                    69********.**********....33334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-151566IPR001471AP2/ERF domain
CDDcd000182.22E-201575No hitNo description
SuperFamilySSF541711.5E-241676IPR016177DNA-binding domain
SMARTSM003803.1E-361680IPR001471AP2/ERF domain
PROSITE profilePS5103223.7621674IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.1E-321675IPR001471AP2/ERF domain
PRINTSPR003677.4E-121728IPR001471AP2/ERF domain
PRINTSPR003677.4E-124056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MEEDPSKGDG GNGETKYRGV RRRPWGKYAA EIRDSARQGA RIWLGTFNTA EEAARAYDRA  60
AYAMRGSLAV LNFPDEVPSR RTGSASTSWS MAREQGNQVI EFECLDDKVL EDMLEHGEKR  120
GKKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-321612414131Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010940608.11e-87ethylene-responsive transcription factor 14
SwissprotQ9LTC58e-37ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A3Q0HTE95e-66A0A3Q0HTE9_PHODC; ethylene-responsive transcription factor 14-like
STRINGXP_008780729.18e-67(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.14e-30Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]