PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010939773.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | Nin-like | ||||||||
Protein Properties | Length: 253aa MW: 29494.5 Da PI: 4.9723 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 89.7 | 2.4e-28 | 115 | 165 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek +++e++s+yF++pi++AAkeL++++T+LK++CR++GI+RWPhRk+ksl XP_010939773.1 115 EKVLTFEEVSHYFYMPITQAAKELNIGVTLLKKKCRELGIPRWPHRKLKSL 165 7889*********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.359 | 100 | 187 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.8E-22 | 118 | 165 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MDNEQLGNWQ LVNDGVGFGE ENPDFSVLPI WTWQLDSFLE EEVLDVAPLV QSYPSEPFFP 60 TQDLFQEEPS SMFDGENGFW DDMKEGTENK KAASVCHGEK RGEKKMRNLR ECREEKVLTF 120 EEVSHYFYMP ITQAAKELNI GVTLLKKKCR ELGIPRWPHR KLKSLQTLIK NVKVMQEFGR 180 EDGDVGEAKI IRSALEILEQ ERKLVEKEPA TQLEEKTKRL RQACFKANYK KRRHMELEEP 240 QASAAFSFRC IED |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019710662.1 | 0.0 | protein RKD1-like | ||||
TrEMBL | A0A3Q0IFA1 | 1e-155 | A0A3Q0IFA1_PHODC; protein RKD1-like | ||||
STRING | XP_008802620.1 | 1e-156 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4590 | 33 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 8e-47 | RWP-RK domain-containing protein |