PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010938118.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 369aa    MW: 41571.6 Da    PI: 7.5579
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010938118.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.71.8e-56161431129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdee++++yL +k+ ++++++  +i +vd++k+ePwdLp+k k eeke yfF++rd+ky+tg+r+nrat++gyWkatgkd+e+++ 
  XP_010938118.1  16 LPPGFRFHPTDEEIITHYLSPKALNRSFSA-AAIGQVDLNKCEPWDLPSKSKMEEKERYFFCQRDRKYPTGTRTNRATEAGYWKATGKDREIYRG 109
                     79*************************999.78***************9889999**************************************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +g lvg+kktLvfykgrapkgekt+Wvmheyrle
  XP_010938118.1 110 RGILVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 143
                     ********************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-6413168IPR003441NAC domain
PROSITE profilePS5100559.06316167IPR003441NAC domain
PfamPF023651.4E-2817142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MPRSSTRGEE EESIELPPGF RFHPTDEEII THYLSPKALN RSFSAAAIGQ VDLNKCEPWD  60
LPSKSKMEEK ERYFFCQRDR KYPTGTRTNR ATEAGYWKAT GKDREIYRGR GILVGMKKTL  120
VFYKGRAPKG EKTNWVMHEY RLEGKAPNSI IPITAKDEWV VCRIFHKNIG IKKSPVPGLE  180
RMSSFGDDFL DSSTLPPLMD PSYYSSNTRP TPSYINEGGE GFEFKGIPTS SSSMPSYYSS  240
MLGVENRQDM ISSLQESSGN RPQNSLFYPQ VPPQSSHFSL AEAANLGYLH HDNAMLRALA  300
TTNAASSAIR RPCKVEQYSN QSMISPSQES GPTAERNTEI SSMVSKHYND LDEPCSAGSV  360
MDFDNLWKY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-521417315171NO APICAL MERISTEM PROTEIN
1ut4_B6e-521417315171NO APICAL MERISTEM PROTEIN
1ut7_A6e-521417315171NO APICAL MERISTEM PROTEIN
1ut7_B6e-521417315171NO APICAL MERISTEM PROTEIN
4dul_A6e-521417315171NAC domain-containing protein 19
4dul_B6e-521417315171NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010938118.20.0LOW QUALITY PROTEIN: NAC domain-containing protein 79
TrEMBLA0A2H3Y4N80.0A0A2H3Y4N8_PHODC; NAC domain-containing protein 92-like isoform X2
STRINGXP_008793365.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP186238104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-103NAC domain containing protein 100