PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010931300.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 281aa    MW: 31454.9 Da    PI: 5.2174
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010931300.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-1868118155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr p   + r  r +lg+f ta eAa a+++a+++++g
  XP_010931300.1  68 CNYRGVRQRT-WGKWVAEIRKP---N-RgSRLWLGTFNTALEAALAYDKAARAMYG 118
                     56*****999.**********8...3.35************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.61E-2968127No hitNo description
PfamPF008473.1E-1368118IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-2069126IPR016177DNA-binding domain
SMARTSM003806.6E-3469132IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-3169127IPR001471AP2/ERF domain
PROSITE profilePS5103221.24669126IPR001471AP2/ERF domain
PRINTSPR003676.6E-107081IPR001471AP2/ERF domain
PRINTSPR003676.6E-1092108IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MAEQERKQRV RNPHGGIHPV AEIPAEWGEL NRQPDGSNDG EKYIQRVPAK GSRKGCMRGK  60
GGPENSHCNY RGVRQRTWGK WVAEIRKPNR GSRLWLGTFN TALEAALAYD KAARAMYGPH  120
ARLNLPECST VAKDKTLAPA ECDEFTATTS QHSGLNPPQS TVEAATCMVK TDEELFEHFD  180
CLQDLHQDMF GIGNILRDVD ADPSDCTGTA QNRLGGVDEI TNWHCGTWCH MEQFPADMDC  240
SYDFTGPTRQ DLEFGIASDQ GMPELEFPDL SFFPESHRFY S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-1669126563ATERF1
3gcc_A3e-1669126563ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010931300.10.0dehydration-responsive element-binding protein 2C
TrEMBLA0A2H3Y2D91e-147A0A2H3Y2D9_PHODC; dehydration-responsive element-binding protein 2B-like isoform X1
STRINGXP_008792179.11e-147(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP73153551
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-36ERF family protein