PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010929645.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 334aa    MW: 37345.1 Da    PI: 5.8518
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010929645.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.6e-08175222455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_010929645.1 175 SHSLAERVRREKISERMKMLQGLVPGC----DKVTGKALMLDEIINYVQSLQ 222
                     8*************************9....555*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.31E-16169236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.70E-10169226No hitNo description
PROSITE profilePS5088815.326171221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-16171236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.1E-6175222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-9177227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MEAFSYEQHY PFLLDSPILP PTPFEMSLPI QQVGEMNNNS PSCFPYYFSA EAILGVSSVD  60
ARAYESSSSL DTATKAPSVE SQIAPPSVVI ESHDEKVPKH QGSMEKKRKN GDKTCSSSGR  120
SKESKSGKQR KRNCELKGKE EKKPKCDDLK ATEAGEEPPP GYIHVRARRG QATDSHSLAE  180
RVRREKISER MKMLQGLVPG CDKVTGKALM LDEIINYVQS LQNQVEFLSM KLASTNPSLY  240
DFGVDLDDFM DKPEKMENIP HQLTLVNPTT HFQPTAFDNA TNNYQMIDPP VPLLLHCQGP  300
TAFPQDGGSF MIQVGEQRQP ILDQFEHNNM SSFQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019708362.10.0transcription factor bHLH137
TrEMBLA0A2H3XZR41e-154A0A2H3XZR4_PHODC; transcription factor bHLH137-like
STRINGXP_008791059.11e-151(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23583791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.29e-56bHLH family protein