PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010928474.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 337aa    MW: 37014.8 Da    PI: 9.4997
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010928474.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.35e-07208251755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     e+ r+RR+ri ++   L +l+P+      ++++  ++L++A +Y++ L+
  XP_010928474.1 208 EIARQRRKRISDRTRILETLMPWE-----RRMDTGTMLQEAHKYVQFLE 251
                     788********************9.....79**************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.639201250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.05E-6204254No hitNo description
SuperFamilySSF474591.19E-9206264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-9207258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-7207256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-4208251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MEREIPTGVL VSSANAAAIA AEERRRTVPM LPTAASFPAG ALPFYAIESG VSSSQIGCSP  60
APYPDQLDFG FFAEDLAALP QCHLVECIAC MDPRLKLKSP KVEPPANGKQ AWISPEIGSY  120
GFHRLPGLQS LEPLPEAAKK SPISPRLSGD LISIIELSHK RFHPSSPPTT HAPSPPPPPP  180
LRSPSTCYAF QRRGAAARNL RPAVPSSEIA RQRRKRISDR TRILETLMPW ERRMDTGTML  240
QEAHKYVQFL EAQVTALQTM PCSSGFAPVH LPAGRFRGLE LLNRQQLLQV MMNSPVVQDM  300
LYQKGLCVFS AEQVAALRQA EEQRPQVIRL LSSSVTK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010928474.10.0uncharacterized protein LOC105050231
TrEMBLA0A2H3WZQ51e-179A0A2H3WZQ5_PHODC; transcription factor bHLH53
STRINGXP_008776122.11e-180(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2498544
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.13e-26bHLH family protein