PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010927803.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 350aa MW: 39054.4 Da PI: 8.2256

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010927803.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.5	6.7e-10	188	235	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka iL + ++Y++sLq XP_010927803.1 188 SHSLAERVRREKISQRMKLLQGLVPGC----DKIIGKALILDEIINYVQSLQ 235 8***********************9....899***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.4E-16	182	251	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.01E-8	182	239	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.3E-16	184	252	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	14.869	184	234	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.3E-7	188	235	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	3.9E-8	190	240	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence Send to blast
MTPHLFLLCL LSYFLPYARM AAFSYQHHHP LLQDSPFLPN SPIKLPLPQL QVGEVTNVSP 60 GFLYCNPPEA ITEASANEAR TFESSSSLNS ATIPPSAEAQ MDYSSSVLVG GEGAAKPQGS 120 METKRKNRDG TSLSSFQSKD TKESKSRKHK STEGKKPKAE EVKEREPCDE APPGYIHVRA 180 RRGQATDSHS LAERVRREKI SQRMKLLQGL VPGCDKIIGK ALILDEIINY VQSLQKQVEF 240 LSMKLASLST TMYDFGVDLN GHMDHQQRIG SVSRDSLPVP SVPRRNHIRP IAFEEDIIKD 300 YPMMDPSPFS LHRQGPQAAS QDNSSFLMQV GEQRQGFLNP MMFNSMCSFQ

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence Send to blast

MTPHLFLLCL LSYFLPYARM AAFSYQHHHP LLQDSPFLPN SPIKLPLPQL QVGEVTNVSP  60
GFLYCNPPEA ITEASANEAR TFESSSSLNS ATIPPSAEAQ MDYSSSVLVG GEGAAKPQGS  120
METKRKNRDG TSLSSFQSKD TKESKSRKHK STEGKKPKAE EVKEREPCDE APPGYIHVRA  180
RRGQATDSHS LAERVRREKI SQRMKLLQGL VPGCDKIIGK ALILDEIINY VQSLQKQVEF  240
LSMKLASLST TMYDFGVDLN GHMDHQQRIG SVSRDSLPVP SVPRRNHIRP IAFEEDIIKD  300
YPMMDPSPFS LHRQGPQAAS QDNSSFLMQV GEQRQGFLNP MMFNSMCSFQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010927803.1	0.0	transcription factor bHLH137 isoform X1
TrEMBL	A0A2H3XYJ7	0.0	A0A2H3XYJ7_PHODC; transcription factor bHLH137-like
STRING	XP_008790706.1	1e-171	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2358	37	91

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	1e-52	bHLH family protein