PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010926991.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 293aa    MW: 33034.2 Da    PI: 8.2152
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010926991.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.61.8e-1444127186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  v  L++a++ ++   +r+klk+++We+v++ + ++ g +r   +p+qCk+k e+++kry+ + +  ++      s++p+f +l+
  XP_010926991.1  44 EWSEGAVGSLLDAYEAKWVLRNRAKLKGQDWEDVARLVsARSGSTRpakTPTQCKNKVESMKKRYRSESAAGGG------SRWPLFARLD 127
                     5*************************************855555554449*****************9998886......4799999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.5E-1942127No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MEGNLQQVNS NPSLVAIGVD DSKEEEEEHV RVVGPGSDRT KRDEWSEGAV GSLLDAYEAK  60
WVLRNRAKLK GQDWEDVARL VSARSGSTRP AKTPTQCKNK VESMKKRYRS ESAAGGGSRW  120
PLFARLDGLV RCRAPTTALV LVDRPPERPT PSSHSPEPNG RAVAEQAECE ETKGKEHVSE  180
IHKEEHCNMQ PYDPCDGKQQ INNKKKRRMR KREESWEVME SIQWLAEVAL RVEQGRMEAM  240
REVERMRAQA EAKKGEMDLK RIEIIANTQL QIAKLLIGND DNVDSALRIG RGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203207KKKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010926991.10.0trihelix transcription factor ASIL1
TrEMBLA0A2H3YTE61e-176A0A2H3YTE6_PHODC; uncharacterized protein LOC103716939
STRINGXP_008782031.11e-154(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP73333346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.19e-62sequence-specific DNA binding transcription factors