PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925184.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Nin-like
Protein Properties Length: 268aa    MW: 31077.6 Da    PI: 8.5577
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925184.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.58.4e-26150199352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      +i ++++++yF +pi+ AAke++v++TvLK +CR++GI+RWPhRk+ksl
  XP_010925184.1 150 TDIGFDEIKNYFCMPITRAAKEMKVGVTVLKNRCRELGINRWPHRKMKSL 199
                     6899********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.132135219IPR003035RWP-RK domain
PfamPF020421.5E-20152199IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MEVRVLVRER GLECSHRMFE CTLFLRCSET DALVPFPESL DQIDNLHGSI SMSDNSAALV  60
PYQHHSPPAL NDLALGDINL DPFTRDNYLT PHYCGDVISD IAPLNMIASS NGVHCGKISC  120
NYNYPFEVSK VDQVGQRSIK RRTNRRSRST DIGFDEIKNY FCMPITRAAK EMKVGVTVLK  180
NRCRELGINR WPHRKMKSLM TLIHNVQELG KGEESMRELE RLEEHKRLIE ENPEMELSER  240
TKKLRQACFK AHYKRRKALR NHCFDIRN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017701366.11e-131protein RKD4
TrEMBLA0A2H3ZYY61e-130A0A2H3ZYY6_PHODC; protein RKD4
STRINGXP_008807243.17e-96(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP45903365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.14e-31RWP-RK domain-containing protein