PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010924400.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

VOZ

Protein Properties

Length: 507aa MW: 56551.1 Da PI: 5.1761

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010924400.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	440.7	1.8e-135	215	431	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 pppsaflgpkcalwdc+rpaqgsew+qdycssfhatlalneg+pg+tpvlrp+gidlkdg+lfaal ak+qgk+vgip+c+gaatakspwna+el XP_010924400.1 215 PPPSAFLGPKCALWDCPRPAQGSEWCQDYCSSFHATLALNEGPPGMTPVLRPGGIDLKDGPLFAALCAKTQGKNVGIPVCQGAATAKSPWNAPEL 309 89******************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdls+lege++rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqp+ +fewhlyeyei+++d+lalyrle+klv XP_010924400.1 310 FDLSVLEGESLREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGLKRSYYMDPQPLAHFEWHLYEYEISNCDDLALYRLEFKLV 404 ******************************************************************************************* PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 d+kksak+k++++sl dlq+++grl+a XP_010924400.1 405 DAKKSAKAKLTSNSLLDLQQQMGRLNA 431 **********************986 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence Send to blast
MGKGSKTGCR SASHQLFKDK AKNRVDDLQG IFTDLQSARK ESRTADVAVL EEQVHQMLRE 60 WKSELNEPSP ASSLLGNAHV SSELPSETLR LLQLSEEEDD ATSKMCEPAP GNAKAEPLDV 120 PEPNVEKIQG GGTAGFQQEL TEHGFLYGNE YQSNLPAESD HGIINCLDGT THLEFQQFSL 180 HQELHHNLYL DSSISEENGG DVLPHMSNFL PTICPPPSAF LGPKCALWDC PRPAQGSEWC 240 QDYCSSFHAT LALNEGPPGM TPVLRPGGID LKDGPLFAAL CAKTQGKNVG IPVCQGAATA 300 KSPWNAPELF DLSVLEGESL REWLFFDKPR RAFESGNRKQ RSLPDYSGRG WHESRKQVMK 360 EFGGLKRSYY MDPQPLAHFE WHLYEYEISN CDDLALYRLE FKLVDAKKSA KAKLTSNSLL 420 DLQQQMGRLN AENSIDNKKN AKIRTKANQM DIAENIYSTP NTANQKENEL NVYHASDKMA 480 SFNENSGYGP NFQYFYSVEN LKDYCGT

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence Send to blast

MGKGSKTGCR SASHQLFKDK AKNRVDDLQG IFTDLQSARK ESRTADVAVL EEQVHQMLRE  60
WKSELNEPSP ASSLLGNAHV SSELPSETLR LLQLSEEEDD ATSKMCEPAP GNAKAEPLDV  120
PEPNVEKIQG GGTAGFQQEL TEHGFLYGNE YQSNLPAESD HGIINCLDGT THLEFQQFSL  180
HQELHHNLYL DSSISEENGG DVLPHMSNFL PTICPPPSAF LGPKCALWDC PRPAQGSEWC  240
QDYCSSFHAT LALNEGPPGM TPVLRPGGID LKDGPLFAAL CAKTQGKNVG IPVCQGAATA  300
KSPWNAPELF DLSVLEGESL REWLFFDKPR RAFESGNRKQ RSLPDYSGRG WHESRKQVMK  360
EFGGLKRSYY MDPQPLAHFE WHLYEYEISN CDDLALYRLE FKLVDAKKSA KAKLTSNSLL  420
DLQQQMGRLN AENSIDNKKN AKIRTKANQM DIAENIYSTP NTANQKENEL NVYHASDKMA  480
SFNENSGYGP NFQYFYSVEN LKDYCGT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010924400.1	0.0	transcription factor VOZ1 isoform X4
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2H3YG76	0.0	A0A2H3YG76_PHODC; transcription factor VOZ1 isoform X2
STRING	XP_008798279.1	0.0	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]