PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010921157.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 276aa    MW: 30926.4 Da    PI: 8.9453
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010921157.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.77.3e-21133194259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS.STTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae.dpkvveitYegeHnhe 59 
                      Dgy+WrKYGqK++ gs++ rsYY+C ++   gC+++k+v+++++ +p  ++++Y+  H+++
  XP_010921157.1 133 VDGYQWRKYGQKKIYGSKYQRSYYKCVHRknqGCQATKQVQQKDDgNPPKFIVIYQMPHTCN 194
                     5***************************98889*******9877427789**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.6E-23122195IPR003657WRKY domain
SuperFamilySSF1182901.96E-20125194IPR003657WRKY domain
SMARTSM007742.3E-28132195IPR003657WRKY domain
PROSITE profilePS5081117.419134191IPR003657WRKY domain
PfamPF031062.2E-23134193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MDSKVNEMLN PVTEKMPTLN RLMAIEELNR GRELTTQLRA LLSAVNPANK QVETAGVLFE  60
EVLKSFSQAL SVLKPGGKPD MEPGATGACL PASSGGRKEP GVKRSQLEQT RGDQGHRRRC  120
TISWTTITSM PLVDGYQWRK YGQKKIYGSK YQRSYYKCVH RKNQGCQATK QVQQKDDGNP  180
PKFIVIYQMP HTCNNLDVSS KVGMDYSSIA KTSVLDDGSK SLDIQTQQPL LSGNLKMEEP  240
EKCLLTDIAS MHSPVMSNDM NWIMDMTWLD GEVYIK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010921157.10.0probable WRKY transcription factor 70
TrEMBLA0A2H3XEU51e-74A0A2H3XEU5_PHODC; probable WRKY transcription factor 46
STRINGXP_008782667.12e-75(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-25WRKY DNA-binding protein 70