PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010921034.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 313aa    MW: 34611.4 Da    PI: 4.7847
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010921034.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.3e-2066116155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa a+++a+++++g
  XP_010921034.1  66 CKYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTALEAALAYDEAARAMYG 116
                     79*****999.**********8...3.35************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.37E-3066124No hitNo description
PfamPF008474.4E-1466116IPR001471AP2/ERF domain
SMARTSM003803.8E-3567130IPR001471AP2/ERF domain
PROSITE profilePS5103221.6867124IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.2E-3167125IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-2167124IPR016177DNA-binding domain
PRINTSPR003671.0E-96879IPR001471AP2/ERF domain
PRINTSPR003671.0E-990106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MAEPERKKRV RRSPNGPNSI TETIARWREH NRQLGCSSSG EKRRAPAKGS RKGCMKGKGG  60
PDNPQCKYRG VRQRTWGKWV AEIREPNRGS RLWLGTFPTA LEAALAYDEA ARAMYGPYAR  120
LNLPQFDDDA SAHVTTSGSC ESTATSHDSD VSDVWNPRAP EVKVPKKEPE EIRNDSLLPA  180
PVGAATNMKE EPGEELFGPL DQLEDLPEDM FNVGDMLRMM DADPTNKGVG GEGMDDSTGH  240
SDAVADTSWQ LSSPSVFSFQ LQNPDAKLLG SLHHMDQSPS DMGYGYDDFV KQLEQDWGYG  300
LPDDMGMWES GLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-1568124663ATERF1
3gcc_A1e-1568124663ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010921034.10.0dehydration-responsive element-binding protein 2B isoform X1
TrEMBLA0A2H3YVJ11e-168A0A2H3YVJ1_PHODC; dehydration-responsive element-binding protein 2B-like isoform X2
STRINGXP_008804144.11e-169(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP73153551
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-40ERF family protein