PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920371.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WOX
Protein Properties Length: 291aa    MW: 32618.7 Da    PI: 8.4809
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920371.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.14.9e-162282357
                    --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    +++ +t+eq ++L +l++    r ps e++++++++l    +++ ++V++WF N +a+e++
  XP_010920371.1 22 TKWIPTNEQARILRDLYHTygVRSPSVEQIQKISNRLrqygKIEGKNVFYWFSNYKARERR 82
                    78****************767**************************************97 PP
2Wus_type_Homeobox92.15e-302084265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++t+W Pt+eQ +iL++ly+  G+r+P+ e+iq+i+++L++yGkie+kNVfyWF N kaRer+k+
     XP_010920371.1 20 SCTKWIPTNEQARILRDLYHtYGVRSPSVEQIQKISNRLRQYGKIEGKNVFYWFSNYKARERRKK 84
                       689****************988*****************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.76E-101587IPR009057Homeodomain-like
PROSITE profilePS500719.5231783IPR001356Homeobox domain
SMARTSM003890.00182087IPR001356Homeobox domain
CDDcd000862.69E-42284No hitNo description
PfamPF000461.5E-132282IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.2E-52683IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MKLQSISVDG SESDSLSRQS CTKWIPTNEQ ARILRDLYHT YGVRSPSVEQ IQKISNRLRQ  60
YGKIEGKNVF YWFSNYKARE RRKKRLSADI PSSSNTTTPP GACSSTTSTL ALSQLSAPAD  120
ASFHLSAMAV CWFCDVGSNA TCFPHGPHVV GQMGSSECPG SVLMEKRYKC YFMSGGEGES  180
ALERNKGWVM GLHSTAMSHH TRVQKAKIRT LPLFPIHTQE QERVEQEEHQ EGKETEEYGV  240
RSFVAGKPQQ PKPIGHIPAF HLDGGQQQQE QYHCCLELTL NSYHHGPLRS T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029120161.11e-124protein WUSCHEL
TrEMBLA0A3Q0IER33e-80A0A3Q0IER3_PHODC; protein WUSCHEL-like
STRINGXP_008807610.16e-81(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124653136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-29WOX family protein