PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010916103.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 532aa    MW: 57103.4 Da    PI: 6.149
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010916103.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.6e-30272330259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  XP_010916103.1 272 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRSILITTYEGSHNHP 330
                     7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-33256332IPR003657WRKY domain
SuperFamilySSF1182906.15E-28264332IPR003657WRKY domain
PROSITE profilePS5081129.562266332IPR003657WRKY domain
SMARTSM007744.7E-37271331IPR003657WRKY domain
PfamPF031065.9E-27273330IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MESGDHFPTA IEFPVVPAGE KRVDEMDFFS DEKKKRSREE PDLDLKVPSS SIKKEDLTIN  60
TGLNLRTANT GSDQSTVDEG LSPPEDDKEG EGELAAMQAE LARMNEENQR LRGMLNQVTT  120
NYNALQMHVV ALMQQRNQKN GSPQGHEAVD EKTDGKIVPR QFIDLGPASN TDEPSQSSTE  180
GGSRHLSSSP TNNVEAGSMD YRLHKNNMNK EIVPINDERS NREDSPDPSS EGWNPNKAPK  240
LAPSKSAEQT QETTMRKARV SVRARSEAPM ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA  300
TGCPVRKQVQ RCAEDRSILI TTYEGSHNHP LPPAAMAMAS TTSAAASMLL SGSMSSTDGL  360
MNSGFLARTI LPCSSSMATI SASAPFPTVT LDLTHTPNPL QFQRPPAPFQ VPFQNGPPSF  420
GGPPQPLSLP QVFGQTLSNQ TKFSGLQMSA DMEGAQFHHP KTPSATSLAD TVNAATAAIT  480
ADPNFTAALA AAITSIIGGG HQANSNNNTS ANNTTGNGNG NAKPANSNFL AT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-22258334176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010916103.20.0probable WRKY transcription factor 31
SwissprotQ9XEC31e-139WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2H3XIS90.0A0A2H3XIS9_PHODC; probable WRKY transcription factor 31
STRINGXP_008784385.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22070.11e-120WRKY DNA-binding protein 31