PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010915101.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family HD-ZIP
Protein Properties Length: 305aa    MW: 35078.9 Da    PI: 4.4155
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010915101.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.93.9e-1982135356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t++q++ Le+ Fe ++++  e++ +LA+ lgL+ rqV +WFqNrRa++k
  XP_010915101.1  82 KKRRLTADQVQFLERSFELENKLEPERKVQLARDLGLQPRQVAIWFQNRRARWK 135
                     56789************************************************9 PP
2HD-ZIP_I/II132.61.4e-4281171191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekkrrl+++qv++LE+sFe e+kLeperKv+lar+Lglqprqva+WFqnrRAR+ktkqlEkdyeaL+++ydalk++ ++L +e+e+L++e+
  XP_010915101.1  81 EKKRRLTADQVQFLERSFELENKLEPERKVQLARDLGLQPRQVAIWFQNRRARWKTKQLEKDYEALRSSYDALKTDYDNLLDEKEKLQAEV 171
                     69**************************************************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.25E-1973139IPR009057Homeodomain-like
PROSITE profilePS5007117.65377137IPR001356Homeobox domain
SMARTSM003899.5E-1980141IPR001356Homeobox domain
CDDcd000863.62E-1782138No hitNo description
PfamPF000461.4E-1682135IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.1E-1983144IPR009057Homeodomain-like
PRINTSPR000319.3E-6108117IPR000047Helix-turn-helix motif
PROSITE patternPS000270112135IPR017970Homeobox, conserved site
PRINTSPR000319.3E-6117133IPR000047Helix-turn-helix motif
PfamPF021839.6E-18137178IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MAGRSYESSK MSVLLPNNWI SSEAIEALLS SGPSHGEFPG SGSVMNFEDV HGQRPEWPFC  60
RPFELEETGD EDLDEGVHRP EKKRRLTADQ VQFLERSFEL ENKLEPERKV QLARDLGLQP  120
RQVAIWFQNR RARWKTKQLE KDYEALRSSY DALKTDYDNL LDEKEKLQAE VLSLTNKVFL  180
KDKDIGSSEP FECTKFPHQP QNMVSDPMGE MKRVDGQVTV CKQEDLSSVN STVLDSGSPP  240
YIDEVDHRST LMEPVDSSNA FEPDHSDLSH TEEVDEVQGC GFLRLEDNLN NYRFPAEDQS  300
YWLWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129137RRARWKTKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010915101.10.0homeobox-leucine zipper protein HAT5
TrEMBLA0A3Q0I7X61e-164A0A3Q0I7X6_PHODC; homeobox-leucine zipper protein HAT5-like
STRINGXP_008793499.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16055714
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.16e-49homeobox 1