PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010913605.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Trihelix

Protein Properties

Length: 312aa MW: 34493.8 Da PI: 9.6871

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010913605.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	53.2	7.6e-17	34	120	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++ vl+L+ea+++++ +r+klk+ +We++++++ ++ ++p qCk+k+e+++kry+++ + + + s+s s+++++ +++ XP_010913605.1 34 WSESGVLCLLEAYESRWILRNRAKLKGSDWEDIARQVsvrcLGTKALKTPAQCKNKIESMKKRYRAESAAAHE--SKSCSSWQFYARMD 120 *********************************9988444444567**************9999998..567778****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.5E-19	31	121	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence Send to blast
MDSTQGGSNH LPAGPEHSLV AAPRGQDKGK RDDWSESGVL CLLEAYESRW ILRNRAKLKG 60 SDWEDIARQV SVRCLGTKAL KTPAQCKNKI ESMKKRYRAE SAAAHESKSC SSWQFYARMD 120 GLLKGTPDCV AQPKSNHNIN LQALPKVAAE AEVEGCLKDS NQDDALNTLP VDANAVNKDN 180 NDKKESKGDS DVSAPRNKVA NTKDETGKAR NPSKRRKGSG DEVADSIRLI AQSVLKIEQA 240 RIEMYKDSER MRVEAEIKRG EMELRRTEII AKTQLQIAKL FAKKSRGRSN KSEGSSLATE 300 IDMLPRRDGT GD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010913605.1	0.0	trihelix transcription factor ASIL1
TrEMBL	A0A3Q0HXX3	0.0	A0A3Q0HXX3_PHODC; trihelix transcription factor ASIL1-like isoform X5
STRING	XP_008782065.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7333	33	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	2e-63	sequence-specific DNA binding transcription factors