PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010912423.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 429aa    MW: 49445.9 Da    PI: 8.4895
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010912423.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix73.92.8e-23108205186
        trihelix   1 rWtkqevlaLiearr........emeerlrrgk...lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 
                     +Wt ++v++Li+a++        e +++ rr++   +kk +W+ +sk+m erg+ +sp+qC++k+++lnkryk++ ++ +++ +++++++ +++d
  XP_010912423.1 108 KWTGRMVRLLITAVSyvgddaisEYNNDGRRKSavlQKKRKWKCISKVMTERGCYVSPQQCEDKFNDLNKRYKRLVDILGRGtACKVVENPALLD 202
                     7**************555555553333444333777**********************************************55*********** PP

        trihelix  84 qle 86 
                     q++
  XP_010912423.1 203 QMK 205
                     *97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.6E-20106231No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MEGNLPTANM IPASYGILDL QGSVHMHHQQ HPQASFGHHQ QQPSSTQLHQ SLMVHPPMHE  60
VFPLTANHMK DVKTSMSDDG DQSLAEDRVN DQDDGGKGKK GTPWQRMKWT GRMVRLLITA  120
VSYVGDDAIS EYNNDGRRKS AVLQKKRKWK CISKVMTERG CYVSPQQCED KFNDLNKRYK  180
RLVDILGRGT ACKVVENPAL LDQMKHISDK LKDDVKKILS SKHLFYEEMC SYHNANRLNL  240
PHDPALQRSL QLALRSRDEH GTRRAVHGNN DEDGQGTDDE KDHAPEHTTL HSDVGGSCFP  300
KRMKHLVDHE EVSFGSPSGL QDCIRRPHPQ DTSVDMKQVF PEGSTVTWVQ KHSKNFPSLQ  360
LEERTHNIKL QMLELERQSF KWQQLSKKKD RELNKMRMEN ERMKLENERL ALELKRREFE  420
VDLNLKSSQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010912422.10.0uncharacterized protein LOC105038344 isoform X1
RefseqXP_010912423.10.0uncharacterized protein LOC105038344 isoform X1
RefseqXP_019703799.10.0uncharacterized protein LOC105038344 isoform X1
RefseqXP_029118384.10.0uncharacterized protein LOC105038344 isoform X1
TrEMBLA0A2H3XI520.0A0A2H3XI52_PHODC; uncharacterized protein LOC103703173
STRINGXP_008784156.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-109sequence-specific DNA binding transcription factors