PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010912386.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 663aa    MW: 72965.9 Da    PI: 7.8384
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010912386.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.82e-093784151954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  XP_010912386.1 378 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 415
                     664459******************************88 PP
2BELL122.22.2e-39245316172
            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     erqelq+kkakL+++l+eV++rY+qy++q+q+v+ sFeavag+gsa+ Yt+lAl++iS++FrcL+daia+qi
  XP_010912386.1 245 ERQELQMKKAKLVNMLDEVEQRYRQYHHQMQIVVTSFEAVAGIGSARTYTALALQTISKQFRCLRDAIAGQI 316
                     79*********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.8E-64172314IPR006563POX domain
PfamPF075264.0E-50178313IPR006563POX domain
PROSITE profilePS5007112.115356419IPR001356Homeobox domain
SMARTSM003891.2E-9359423IPR001356Homeobox domain
CDDcd000865.29E-12359419No hitNo description
SuperFamilySSF466892.69E-17360426IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.6E-29362426IPR009057Homeodomain-like
PfamPF059202.6E-18376415IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 663 aa     Download sequence    Send to blast
MATYFHGTPE IQTDGLQTLY LMNPNYVGYS DTAAAAPANM VLLNSMNSLN PINHQQQQHF  60
VGIPLQPTVA SHESSRPQPI EVPHDVSTVH GLVPRLHCNL WTPTPASNSI DMASQLGPQR  120
PSTMRQPQQV LSLSLSPREM VAPVPEIAPA STEDKKILGS LSSASGVSSG VSGLQSFLMG  180
SKYLKAAQRL LDEVVNVGLG FKGDPAKGTN SKSPMKSNRE SEGTGAGMGE EETSTKRGAD  240
LTTAERQELQ MKKAKLVNML DEVEQRYRQY HHQMQIVVTS FEAVAGIGSA RTYTALALQT  300
ISKQFRCLRD AIAGQIRATS RSLGEEETKS GSSRLRLVDH HLRQQRALQQ LGMIQHNAWR  360
PQRGLPERSV SILRAWLFEH FLHPYPKDSD KIMLAKQTGL TRSQVSNWFI NARVRLWKPM  420
VEEMYMEEMK DQEQNNTDEK ASKSDANENS VSKSSANQEN SPTRTGQADS LKTTQDHPTE  480
TKVSSVAISP SSLGNDKSHA SYYDNEAAMQ PRLKKARRVE SLQPNAMPHS ISFDMKSDET  540
SNRELLMKFM DGQQRAGDQG FSLIAGTASN GGSFGAYPIP DLGRFDSEQF TPRFSGNGVS  600
LTLGLPYCEN LSLSGAQPSF LSNESMPSFN NNPSVAHPSN AYESIDIQNR KRFAAQPLPD  660
FVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-16365423563Homeobox protein Meis2
3k2a_B6e-16365423563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019704008.10.0BEL1-like homeodomain protein 1
RefseqXP_019704009.10.0BEL1-like homeodomain protein 1
RefseqXP_029118381.10.0BEL1-like homeodomain protein 1
TrEMBLA0A2H3ZLM50.0A0A2H3ZLM5_PHODC; BEL1-like homeodomain protein 1
STRINGXP_008784116.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48163758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-131BEL1-like homeodomain 1