PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010908965.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 478aa    MW: 52348.9 Da    PI: 9.3367
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010908965.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.17.6e-33195251360
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  XP_010908965.1 195 DGYNWRKYGQKQVKGSECPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHPK 251
                     9***************************************.***************85 PP
2WRKY94.57.7e-30395451359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     Dg++WrKYGqK+vkg+ +prsYYrCt+++C+v+k ve++++d   +++tYeg+Hnh 
  XP_010908965.1 395 DGFHWRKYGQKVVKGNLYPRSYYRCTTPNCNVRKYVEKASDDSGSFVTTYEGKHNHA 451
                     9*******************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.6E-29190252IPR003657WRKY domain
SuperFamilySSF1182901.07E-25192252IPR003657WRKY domain
SMARTSM007747.7E-37193251IPR003657WRKY domain
PROSITE profilePS5081123.617195252IPR003657WRKY domain
PfamPF031061.3E-25195250IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.3E-31379453IPR003657WRKY domain
SuperFamilySSF1182901.7E-27386453IPR003657WRKY domain
PROSITE profilePS5081130.515388453IPR003657WRKY domain
SMARTSM007741.9E-34393452IPR003657WRKY domain
PfamPF031069.6E-24395450IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MQDAEKIVVA KPVASRPYSN LRSFSELLAD AMNASPVTSF AEATVTIRPK TVRFKPSPNA  60
ALAEVSSLDN ISESRVAFNI SDKASTTISK ADYKTSVLYK PAARVVSRTT ASRLANLGNF  120
DAGHQNPATD VQAPVHVIGQ EKHQFQLQPT LSCQQNSFSH IDMNHIYKPS NSVPESTEQD  180
TRKQPATGGD RPSYDGYNWR KYGQKQVKGS ECPRSYYKCT HPNCPVKKKV ERSFDGQIAE  240
IVYKGEHNHP KPQPPKRLSS GSQGQTVVSE GHGKESDNPL RSHHLVWGNV SDGQVEKGIE  300
ISLPDTTSFL GKAYFSHDPP FATSYNSVAR NPDSAGRLSG ASEFGNATAS IDNDKPNYNR  360
RKNENQVSGA GAVMEGVAEP HSATQTMVES DVSGDGFHWR KYGQKVVKGN LYPRSYYRCT  420
TPNCNVRKYV EKASDDSGSF VTTYEGKHNH ALPAKKTNLA ASDPDAVALN NSRHNLNT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-28195454678Probable WRKY transcription factor 4
2lex_A1e-28195454678Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010908965.10.0WRKY transcription factor 44 isoform X1
RefseqXP_019702822.10.0WRKY transcription factor 44 isoform X1
TrEMBLA0A2H3ZI950.0A0A2H3ZI95_PHODC; WRKY transcription factor 44 isoform X1
STRINGXP_008776094.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.12e-95WRKY family protein