PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010907322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | SAP | ||||||||
Protein Properties | Length: 479aa MW: 52580.9 Da PI: 5.954 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 512.1 | 2.7e-156 | 1 | 478 | 1 | 454 |
SAP 1 mssssssssseseegseggeggdass.............gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfq.... 78 msss +ss s ++ g+ g+e+ + ++ s+ pss+r+r+a+ vwpe f+e++a++va+da+rs Grlaa +a+a +fq XP_010907322.1 1 MSSSPASSPS-EGGGAGGEEERGDGGdeeivggpsdrppRRSGDPSSTRRRSADAVWPEHFVESVAVRVAVDAARSDGRLAAGPAMAAIFQllth 94 5555443333.333333333333333467899999999989999**********************************************54444 PP SAP 79 .....vcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfa 168 vcstwravsrs+llw+ tr +W r l tW+ee++ hrtarnfrtrr+++ +l pa + alsCr+lalsd+ylaaGf XP_010907322.1 95 eessqVCSTWRAVSRSELLWEDATRGVWYRRWSLLPTWHEEFVRLHRTARNFRTRRSAHSHL--LPA------ASPALSCRRLALSDRYLAAGFL 181 444449***************************************************99765..555......2358****************** PP SAP 169 dGavrlfdletrlhvstflpq.hrdrlGrfsravsGivisd..srlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGl 260 dG++rlf+l + lh++t++++ +rdrlG+fs+++sG+++ + srlvfa dGd++va +d + ++++rra++G++++dG+lvdfaG +rWwvGl XP_010907322.1 182 DGSIRLFELPSGLHLTTYRTHpQRDRLGPFSQSISGLILLSdpSRLVFACQDGDLYVAPLDDPVSGSTRRAHVGNLMEDGTLVDFAGDSRWWVGL 276 ******************986489************887432589************************************************** PP SAP 261 yaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmltelt.elvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasn 354 +aG +Gr++h+Wdaete+lv+ GGsltdP++v GW mlt+l +vGrvr e ++vaCts+rl v+dl ++g v +++e+rr +v s+da + XP_010907322.1 277 FAGLAGRSWHVWDAETEQLVYEGGSLTDPDSVLGWRMLTDLDgPTVGRVRTPEPGAMVACTSSRLQVVDLDDPGEVSNQVEFRRRAVVESVDACD 371 *****************************************8679************************************************** PP SAP 355 eayvvvdsrGvatvrrvenleevcrfr....vrg....aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavs 441 ++vvd rG a+v r+ +l+evcrf+ ++g +g++gC+n gya+v++ g lrvW+ + e ylys+rervg+v + a+dr+va+ XP_010907322.1 372 GRVMVVDLRGLARVLRARTLAEVCRFStvvrLEGhpqqRVQGMVGCMNWGYAVVCSVGSLRVWDASTGE-YLYSFRERVGDVTVVAASDRYVAAW 465 **************************633113446522345799********************99966.************************* PP SAP 442 ssdgtihlldfga 454 +d+ +hl+d+ga XP_010907322.1 466 VNDTGLHLWDYGA 478 ***********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.1280.50 | 6.8E-5 | 97 | 153 | No hit | No description |
SuperFamily | SSF81383 | 2.83E-5 | 98 | 141 | IPR001810 | F-box domain |
Gene3D | G3DSA:2.130.10.10 | 1.5E-16 | 169 | 476 | IPR015943 | WD40/YVTN repeat-like-containing domain |
SuperFamily | SSF50978 | 2.2E-17 | 170 | 292 | IPR017986 | WD40-repeat-containing domain |
SuperFamily | SSF50978 | 2.2E-17 | 350 | 476 | IPR017986 | WD40-repeat-containing domain |
PROSITE profile | PS50294 | 8.624 | 429 | 479 | IPR017986 | WD40-repeat-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009554 | Biological Process | megasporogenesis | ||||
GO:0009908 | Biological Process | flower development | ||||
GO:0030163 | Biological Process | protein catabolic process | ||||
GO:0046622 | Biological Process | positive regulation of organ growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 479 aa Download sequence Send to blast |
MSSSPASSPS EGGGAGGEEE RGDGGDEEIV GGPSDRPPRR SGDPSSTRRR SADAVWPEHF 60 VESVAVRVAV DAARSDGRLA AGPAMAAIFQ LLTHEESSQV CSTWRAVSRS ELLWEDATRG 120 VWYRRWSLLP TWHEEFVRLH RTARNFRTRR SAHSHLLPAA SPALSCRRLA LSDRYLAAGF 180 LDGSIRLFEL PSGLHLTTYR THPQRDRLGP FSQSISGLIL LSDPSRLVFA CQDGDLYVAP 240 LDDPVSGSTR RAHVGNLMED GTLVDFAGDS RWWVGLFAGL AGRSWHVWDA ETEQLVYEGG 300 SLTDPDSVLG WRMLTDLDGP TVGRVRTPEP GAMVACTSSR LQVVDLDDPG EVSNQVEFRR 360 RAVVESVDAC DGRVMVVDLR GLARVLRART LAEVCRFSTV VRLEGHPQQR VQGMVGCMNW 420 GYAVVCSVGS LRVWDASTGE YLYSFRERVG DVTVVAASDR YVAAWVNDTG LHLWDYGAL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_029117302.1 | 0.0 | transcriptional regulator STERILE APETALA | ||||
TrEMBL | A0A2H3X4T7 | 0.0 | A0A2H3X4T7_PHODC; transcriptional regulator STERILE APETALA | ||||
STRING | XP_008778313.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP18481 | 7 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 1e-107 | SAP family protein |